Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 MIR4449-201ENST00000578365 66 ntBASIC32.2■■■□□ 2.75
LAMB1P07942 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.2■■■□□ 2.74
LAMB1P07942 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.19■■■□□ 2.74
LAMB1P07942 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.19■■■□□ 2.74
LAMB1P07942 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LAMB1P07942 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
LAMB1P07942 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
LAMB1P07942 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LAMB1P07942 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LAMB1P07942 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.14■■■□□ 2.74
LAMB1P07942 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.13■■■□□ 2.73
LAMB1P07942 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
LAMB1P07942 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
LAMB1P07942 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.12■■■□□ 2.73
LAMB1P07942 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
LAMB1P07942 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LAMB1P07942 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.11■■■□□ 2.73
LAMB1P07942 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LAMB1P07942 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LAMB1P07942 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
LAMB1P07942 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
LAMB1P07942 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LAMB1P07942 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.06■■■□□ 2.72
LAMB1P07942 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
LAMB1P07942 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
LAMB1P07942 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
LAMB1P07942 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.04■■■□□ 2.72
LAMB1P07942 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
LAMB1P07942 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
LAMB1P07942 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
LAMB1P07942 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
LAMB1P07942 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
LAMB1P07942 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
LAMB1P07942 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LAMB1P07942 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.97■■■□□ 2.71
LAMB1P07942 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.96■■■□□ 2.71
LAMB1P07942 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
LAMB1P07942 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LAMB1P07942 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LAMB1P07942 MIR639-201ENST00000384974 98 ntBASIC31.95■■■□□ 2.71
LAMB1P07942 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.92■■■□□ 2.7
LAMB1P07942 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.92■■■□□ 2.7
LAMB1P07942 DUX4L29-201ENST00000425409 679 ntBASIC31.92■■■□□ 2.7
LAMB1P07942 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LAMB1P07942 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LAMB1P07942 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LAMB1P07942 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LAMB1P07942 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LAMB1P07942 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
LAMB1P07942 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LAMB1P07942 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
LAMB1P07942 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
LAMB1P07942 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
LAMB1P07942 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.89■■■□□ 2.69
LAMB1P07942 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
LAMB1P07942 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LAMB1P07942 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LAMB1P07942 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
LAMB1P07942 CR559946.2-201ENST00000623684 991 ntBASIC31.86■■■□□ 2.69
LAMB1P07942 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LAMB1P07942 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.86■■■□□ 2.69
LAMB1P07942 HSD17B1P1-201ENST00000590052 955 ntBASIC31.86■■■□□ 2.69
LAMB1P07942 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LAMB1P07942 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.85■■■□□ 2.69
LAMB1P07942 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LAMB1P07942 MIR3648-2-201ENST00000581792 180 ntBASIC31.83■■■□□ 2.69
LAMB1P07942 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.83■■■□□ 2.69
LAMB1P07942 AC016575.1-201ENST00000607026 382 ntBASIC31.83■■■□□ 2.69
LAMB1P07942 MIR3648-1-201ENST00000615959 180 ntBASIC31.83■■■□□ 2.69
LAMB1P07942 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
LAMB1P07942 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
LAMB1P07942 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMB1P07942 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LAMB1P07942 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
LAMB1P07942 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.81■■■□□ 2.68
LAMB1P07942 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.8■■■□□ 2.68
LAMB1P07942 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.8■■■□□ 2.68
LAMB1P07942 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
LAMB1P07942 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.8■■■□□ 2.68
LAMB1P07942 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.79■■■□□ 2.68
LAMB1P07942 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LAMB1P07942 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.79■■■□□ 2.68
LAMB1P07942 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LAMB1P07942 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.78■■■□□ 2.68
LAMB1P07942 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
LAMB1P07942 AC021231.2-201ENST00000594613 730 ntBASIC31.77■■■□□ 2.68
LAMB1P07942 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
LAMB1P07942 AL161658.1-201ENST00000623641 1967 ntBASIC31.75■■■□□ 2.67
LAMB1P07942 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
LAMB1P07942 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.75■■■□□ 2.67
LAMB1P07942 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
LAMB1P07942 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.74■■■□□ 2.67
LAMB1P07942 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
LAMB1P07942 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.73■■■□□ 2.67
LAMB1P07942 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LAMB1P07942 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LAMB1P07942 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
LAMB1P07942 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.72■■■□□ 2.67
LAMB1P07942 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LAMB1P07942 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms