Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCNT1O60563 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCNT1O60563 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCNT1O60563 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCNT1O60563 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCNT1O60563 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
CCNT1O60563 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNT1O60563 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNT1O60563 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNT1O60563 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
CCNT1O60563 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCNT1O60563 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCNT1O60563 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCNT1O60563 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCNT1O60563 MIR762-201ENST00000390236 83 ntBASIC30.35■■■□□ 2.45
CCNT1O60563 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.34■■■□□ 2.45
CCNT1O60563 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CCNT1O60563 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.33■■■□□ 2.45
CCNT1O60563 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.32■■■□□ 2.45
CCNT1O60563 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
CCNT1O60563 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCNT1O60563 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.32■■■□□ 2.44
CCNT1O60563 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.31■■■□□ 2.44
CCNT1O60563 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.31■■■□□ 2.44
CCNT1O60563 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CCNT1O60563 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.3■■■□□ 2.44
CCNT1O60563 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
CCNT1O60563 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCNT1O60563 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCNT1O60563 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCNT1O60563 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCNT1O60563 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
CCNT1O60563 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCNT1O60563 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCNT1O60563 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCNT1O60563 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CCNT1O60563 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
CCNT1O60563 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.21■■■□□ 2.43
CCNT1O60563 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNT1O60563 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CCNT1O60563 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNT1O60563 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCNT1O60563 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
CCNT1O60563 AC005559.1-201ENST00000589661 871 ntBASIC30.2■■■□□ 2.43
CCNT1O60563 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCNT1O60563 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
CCNT1O60563 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CCNT1O60563 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CCNT1O60563 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCNT1O60563 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.16■■■□□ 2.42
CCNT1O60563 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCNT1O60563 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CCNT1O60563 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.15■■■□□ 2.42
CCNT1O60563 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.15■■■□□ 2.42
CCNT1O60563 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.15■■■□□ 2.42
CCNT1O60563 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCNT1O60563 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.14■■■□□ 2.42
CCNT1O60563 AP006261.1-201ENST00000584783 668 ntBASIC30.14■■■□□ 2.42
CCNT1O60563 DUX4L28-201ENST00000623687 678 ntBASIC30.14■■■□□ 2.42
CCNT1O60563 AL135925.1-201ENST00000605920 1701 ntBASIC30.13■■■□□ 2.41
CCNT1O60563 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCNT1O60563 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CCNT1O60563 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.12■■■□□ 2.41
CCNT1O60563 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.12■■■□□ 2.41
CCNT1O60563 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.12■■■□□ 2.41
CCNT1O60563 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
CCNT1O60563 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.11■■■□□ 2.41
CCNT1O60563 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CCNT1O60563 AL162393.1-201ENST00000437852 946 ntBASIC30.1■■■□□ 2.41
CCNT1O60563 MIR3665-201ENST00000578708 105 ntBASIC30.1■■■□□ 2.41
CCNT1O60563 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCNT1O60563 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.09■■■□□ 2.41
CCNT1O60563 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.08■■■□□ 2.41
CCNT1O60563 ABCB10P1-201ENST00000614297 2181 ntBASIC30.07■■■□□ 2.4
CCNT1O60563 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CCNT1O60563 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCNT1O60563 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCNT1O60563 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCNT1O60563 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCNT1O60563 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.04■■■□□ 2.4
CCNT1O60563 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCNT1O60563 ST7-AS1-201ENST00000456775 1889 ntBASIC30.04■■■□□ 2.4
CCNT1O60563 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.03■■■□□ 2.4
CCNT1O60563 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.03■■■□□ 2.4
CCNT1O60563 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCNT1O60563 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCNT1O60563 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCNT1O60563 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCNT1O60563 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCNT1O60563 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
CCNT1O60563 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
CCNT1O60563 AC010864.1-201ENST00000609407 1511 ntBASIC30.01■■■□□ 2.39
CCNT1O60563 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CCNT1O60563 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCNT1O60563 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30■■■□□ 2.39
CCNT1O60563 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCNT1O60563 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30■■■□□ 2.39
CCNT1O60563 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCNT1O60563 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
CCNT1O60563 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms