Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
FOXN1O15353 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
FOXN1O15353 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
FOXN1O15353 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
FOXN1O15353 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
FOXN1O15353 DUX4L11-201ENST00000611504 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 DUX4L12-201ENST00000614593 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 DUX4L14-201ENST00000621227 1267 ntBASIC32.18■■■□□ 2.74
FOXN1O15353 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.17■■■□□ 2.74
FOXN1O15353 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
FOXN1O15353 ABHD17AP5-201ENST00000580133 923 ntBASIC32.16■■■□□ 2.74
FOXN1O15353 RARRES2P2-201ENST00000394842 485 ntBASIC32.14■■■□□ 2.74
FOXN1O15353 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.14■■■□□ 2.74
FOXN1O15353 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.14■■■□□ 2.73
FOXN1O15353 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
FOXN1O15353 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.13■■■□□ 2.73
FOXN1O15353 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
FOXN1O15353 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
FOXN1O15353 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
FOXN1O15353 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.11■■■□□ 2.73
FOXN1O15353 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.09■■■□□ 2.73
FOXN1O15353 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
FOXN1O15353 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
FOXN1O15353 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.07■■■□□ 2.72
FOXN1O15353 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.06■■■□□ 2.72
FOXN1O15353 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.06■■■□□ 2.72
FOXN1O15353 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
FOXN1O15353 LINC01971-201ENST00000617888 1048 ntBASIC32.04■■■□□ 2.72
FOXN1O15353 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
FOXN1O15353 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
FOXN1O15353 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
FOXN1O15353 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
FOXN1O15353 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
FOXN1O15353 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
FOXN1O15353 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
FOXN1O15353 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
FOXN1O15353 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.99■■■□□ 2.71
FOXN1O15353 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.99■■■□□ 2.71
FOXN1O15353 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.99■■■□□ 2.71
FOXN1O15353 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
FOXN1O15353 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.97■■■□□ 2.71
FOXN1O15353 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
FOXN1O15353 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
FOXN1O15353 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.95■■■□□ 2.71
FOXN1O15353 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
FOXN1O15353 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
FOXN1O15353 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.93■■■□□ 2.7
FOXN1O15353 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.92■■■□□ 2.7
FOXN1O15353 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
FOXN1O15353 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
FOXN1O15353 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
FOXN1O15353 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
FOXN1O15353 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
FOXN1O15353 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
FOXN1O15353 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
FOXN1O15353 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
FOXN1O15353 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
FOXN1O15353 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
FOXN1O15353 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
FOXN1O15353 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
FOXN1O15353 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.84■■■□□ 2.69
FOXN1O15353 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.82■■■□□ 2.68
FOXN1O15353 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
FOXN1O15353 MIR6090-201ENST00000622481 60 ntBASIC31.8■■■□□ 2.68
FOXN1O15353 AC012354.3-201ENST00000623734 483 ntBASIC31.8■■■□□ 2.68
FOXN1O15353 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
FOXN1O15353 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.79■■■□□ 2.68
FOXN1O15353 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
FOXN1O15353 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
FOXN1O15353 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.79■■■□□ 2.68
FOXN1O15353 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.78■■■□□ 2.68
FOXN1O15353 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.77■■■□□ 2.68
FOXN1O15353 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
FOXN1O15353 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.76■■■□□ 2.67
FOXN1O15353 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
FOXN1O15353 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.76■■■□□ 2.67
FOXN1O15353 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
FOXN1O15353 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
FOXN1O15353 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
FOXN1O15353 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
FOXN1O15353 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.74■■■□□ 2.67
FOXN1O15353 WASH5P-204ENST00000632292 975 ntBASIC31.74■■■□□ 2.67
FOXN1O15353 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
FOXN1O15353 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FOXN1O15353 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
FOXN1O15353 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FOXN1O15353 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
FOXN1O15353 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 AC108673.1-201ENST00000510422 1159 ntBASIC31.72■■■□□ 2.67
FOXN1O15353 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.72■■■□□ 2.67
FOXN1O15353 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
FOXN1O15353 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
FOXN1O15353 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.71■■■□□ 2.67
FOXN1O15353 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms