Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC196A0A1B0GTZ2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CCDC196A0A1B0GTZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC196A0A1B0GTZ2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC196A0A1B0GTZ2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC196A0A1B0GTZ2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC196A0A1B0GTZ2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC196A0A1B0GTZ2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC196A0A1B0GTZ2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC196A0A1B0GTZ2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC196A0A1B0GTZ2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC196A0A1B0GTZ2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC196A0A1B0GTZ2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC196A0A1B0GTZ2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC196A0A1B0GTZ2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC196A0A1B0GTZ2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC196A0A1B0GTZ2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CCDC196A0A1B0GTZ2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC196A0A1B0GTZ2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CCDC196A0A1B0GTZ2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC196A0A1B0GTZ2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC196A0A1B0GTZ2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31■■■□□ 2.55
CCDC196A0A1B0GTZ2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC196A0A1B0GTZ2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC196A0A1B0GTZ2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC196A0A1B0GTZ2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC196A0A1B0GTZ2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC196A0A1B0GTZ2 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.96■■■□□ 2.55
CCDC196A0A1B0GTZ2 MIR762-201ENST00000390236 83 ntBASIC30.95■■■□□ 2.55
CCDC196A0A1B0GTZ2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC196A0A1B0GTZ2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC196A0A1B0GTZ2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
CCDC196A0A1B0GTZ2 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.92■■■□□ 2.54
CCDC196A0A1B0GTZ2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.91■■■□□ 2.54
CCDC196A0A1B0GTZ2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.91■■■□□ 2.54
CCDC196A0A1B0GTZ2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.91■■■□□ 2.54
CCDC196A0A1B0GTZ2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC196A0A1B0GTZ2 AL135925.1-201ENST00000605920 1701 ntBASIC30.9■■■□□ 2.54
CCDC196A0A1B0GTZ2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC196A0A1B0GTZ2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.9■■■□□ 2.54
CCDC196A0A1B0GTZ2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
CCDC196A0A1B0GTZ2 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.88■■■□□ 2.53
CCDC196A0A1B0GTZ2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CCDC196A0A1B0GTZ2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
CCDC196A0A1B0GTZ2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.86■■■□□ 2.53
CCDC196A0A1B0GTZ2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC196A0A1B0GTZ2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC196A0A1B0GTZ2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
CCDC196A0A1B0GTZ2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.85■■■□□ 2.53
CCDC196A0A1B0GTZ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.85■■■□□ 2.53
CCDC196A0A1B0GTZ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC196A0A1B0GTZ2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CCDC196A0A1B0GTZ2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.83■■■□□ 2.53
CCDC196A0A1B0GTZ2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC196A0A1B0GTZ2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC196A0A1B0GTZ2 ST7-AS1-201ENST00000456775 1889 ntBASIC30.82■■■□□ 2.53
CCDC196A0A1B0GTZ2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
CCDC196A0A1B0GTZ2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC196A0A1B0GTZ2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC196A0A1B0GTZ2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC196A0A1B0GTZ2 AC005559.1-201ENST00000589661 871 ntBASIC30.8■■■□□ 2.52
CCDC196A0A1B0GTZ2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
CCDC196A0A1B0GTZ2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC196A0A1B0GTZ2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC196A0A1B0GTZ2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
CCDC196A0A1B0GTZ2 ABCB10P1-201ENST00000614297 2181 ntBASIC30.78■■■□□ 2.52
CCDC196A0A1B0GTZ2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC196A0A1B0GTZ2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.77■■■□□ 2.52
CCDC196A0A1B0GTZ2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC196A0A1B0GTZ2 AP006261.1-201ENST00000584783 668 ntBASIC30.77■■■□□ 2.52
CCDC196A0A1B0GTZ2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC196A0A1B0GTZ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.76■■■□□ 2.52
CCDC196A0A1B0GTZ2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
CCDC196A0A1B0GTZ2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.75■■■□□ 2.51
CCDC196A0A1B0GTZ2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC196A0A1B0GTZ2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC196A0A1B0GTZ2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC196A0A1B0GTZ2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC196A0A1B0GTZ2 AC010864.1-201ENST00000609407 1511 ntBASIC30.73■■■□□ 2.51
CCDC196A0A1B0GTZ2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC196A0A1B0GTZ2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.73■■■□□ 2.51
CCDC196A0A1B0GTZ2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.73■■■□□ 2.51
CCDC196A0A1B0GTZ2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC196A0A1B0GTZ2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC196A0A1B0GTZ2 MIR3665-201ENST00000578708 105 ntBASIC30.72■■■□□ 2.51
CCDC196A0A1B0GTZ2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC196A0A1B0GTZ2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC196A0A1B0GTZ2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC196A0A1B0GTZ2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC196A0A1B0GTZ2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC196A0A1B0GTZ2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC196A0A1B0GTZ2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC196A0A1B0GTZ2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC196A0A1B0GTZ2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC196A0A1B0GTZ2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC196A0A1B0GTZ2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.68■■■□□ 2.5
CCDC196A0A1B0GTZ2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC196A0A1B0GTZ2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.67■■■□□ 2.5
CCDC196A0A1B0GTZ2 DUX4L28-201ENST00000623687 678 ntBASIC30.67■■■□□ 2.5
CCDC196A0A1B0GTZ2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms