Protein–RNA interactions for Protein: A0A0J9YX20

TRBV7-6, T-cell receptor beta variable 7-6 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-6A0A0J9YX20 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRBV7-6A0A0J9YX20 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV7-6A0A0J9YX20 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV7-6A0A0J9YX20 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV7-6A0A0J9YX20 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV7-6A0A0J9YX20 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV7-6A0A0J9YX20 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV7-6A0A0J9YX20 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV7-6A0A0J9YX20 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV7-6A0A0J9YX20 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV7-6A0A0J9YX20 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV7-6A0A0J9YX20 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV7-6A0A0J9YX20 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV7-6A0A0J9YX20 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRBV7-6A0A0J9YX20 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV7-6A0A0J9YX20 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-6A0A0J9YX20 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-6A0A0J9YX20 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV7-6A0A0J9YX20 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRBV7-6A0A0J9YX20 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV7-6A0A0J9YX20 AL135925.1-201ENST00000605920 1701 ntBASIC16.78■□□□□ 0.28
TRBV7-6A0A0J9YX20 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-6A0A0J9YX20 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-6A0A0J9YX20 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV7-6A0A0J9YX20 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC16.77■□□□□ 0.28
TRBV7-6A0A0J9YX20 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TRBV7-6A0A0J9YX20 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-6A0A0J9YX20 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-6A0A0J9YX20 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV7-6A0A0J9YX20 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-6A0A0J9YX20 AC135731.1-201ENST00000569415 2548 ntBASIC16.75■□□□□ 0.27
TRBV7-6A0A0J9YX20 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
TRBV7-6A0A0J9YX20 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV7-6A0A0J9YX20 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV7-6A0A0J9YX20 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-6A0A0J9YX20 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-6A0A0J9YX20 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TRBV7-6A0A0J9YX20 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-6A0A0J9YX20 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-6A0A0J9YX20 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV7-6A0A0J9YX20 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-6A0A0J9YX20 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-6A0A0J9YX20 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV7-6A0A0J9YX20 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-6A0A0J9YX20 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-6A0A0J9YX20 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-6A0A0J9YX20 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-6A0A0J9YX20 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV7-6A0A0J9YX20 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV7-6A0A0J9YX20 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV7-6A0A0J9YX20 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TRBV7-6A0A0J9YX20 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-6A0A0J9YX20 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-6A0A0J9YX20 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-6A0A0J9YX20 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-6A0A0J9YX20 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-6A0A0J9YX20 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-6A0A0J9YX20 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV7-6A0A0J9YX20 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-6A0A0J9YX20 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRBV7-6A0A0J9YX20 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-6A0A0J9YX20 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-6A0A0J9YX20 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV7-6A0A0J9YX20 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRBV7-6A0A0J9YX20 AL139393.2-201ENST00000608721 2025 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms