Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRAV34A0A0B4J273 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRAV34A0A0B4J273 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV34A0A0B4J273 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV34A0A0B4J273 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.43■□□□□ 0.86
TRAV34A0A0B4J273 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.43■□□□□ 0.86
TRAV34A0A0B4J273 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV34A0A0B4J273 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRAV34A0A0B4J273 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV34A0A0B4J273 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRAV34A0A0B4J273 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRAV34A0A0B4J273 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV34A0A0B4J273 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV34A0A0B4J273 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV34A0A0B4J273 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.4■□□□□ 0.86
TRAV34A0A0B4J273 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRAV34A0A0B4J273 AC135731.1-201ENST00000569415 2548 ntBASIC20.4■□□□□ 0.86
TRAV34A0A0B4J273 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV34A0A0B4J273 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRAV34A0A0B4J273 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRAV34A0A0B4J273 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRAV34A0A0B4J273 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAV34A0A0B4J273 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV34A0A0B4J273 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV34A0A0B4J273 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV34A0A0B4J273 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV34A0A0B4J273 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV34A0A0B4J273 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV34A0A0B4J273 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV34A0A0B4J273 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV34A0A0B4J273 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV34A0A0B4J273 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV34A0A0B4J273 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV34A0A0B4J273 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV34A0A0B4J273 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV34A0A0B4J273 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRAV34A0A0B4J273 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAV34A0A0B4J273 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV34A0A0B4J273 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.32■□□□□ 0.84
TRAV34A0A0B4J273 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV34A0A0B4J273 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV34A0A0B4J273 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV34A0A0B4J273 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV34A0A0B4J273 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRAV34A0A0B4J273 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV34A0A0B4J273 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV34A0A0B4J273 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV34A0A0B4J273 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV34A0A0B4J273 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV34A0A0B4J273 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV34A0A0B4J273 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV34A0A0B4J273 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV34A0A0B4J273 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAV34A0A0B4J273 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV34A0A0B4J273 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV34A0A0B4J273 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV34A0A0B4J273 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV34A0A0B4J273 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV34A0A0B4J273 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV34A0A0B4J273 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV34A0A0B4J273 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV34A0A0B4J273 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV34A0A0B4J273 AC142086.6-201ENST00000621154 1765 ntBASIC20.24■□□□□ 0.83
TRAV34A0A0B4J273 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV34A0A0B4J273 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV34A0A0B4J273 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRAV34A0A0B4J273 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV34A0A0B4J273 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV34A0A0B4J273 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV34A0A0B4J273 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TRAV34A0A0B4J273 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 AL135925.1-201ENST00000605920 1701 ntBASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAV34A0A0B4J273 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV34A0A0B4J273 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV34A0A0B4J273 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV34A0A0B4J273 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV34A0A0B4J273 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TRAV34A0A0B4J273 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV34A0A0B4J273 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV34A0A0B4J273 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV34A0A0B4J273 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
TRAV34A0A0B4J273 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAV34A0A0B4J273 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV34A0A0B4J273 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms