Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TRGV5A0A0B4J1U4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
TRGV5A0A0B4J1U4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRGV5A0A0B4J1U4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.12■■□□□ 1.45
TRGV5A0A0B4J1U4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRGV5A0A0B4J1U4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.1■■□□□ 1.45
TRGV5A0A0B4J1U4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRGV5A0A0B4J1U4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TRGV5A0A0B4J1U4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRGV5A0A0B4J1U4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRGV5A0A0B4J1U4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.08■■□□□ 1.45
TRGV5A0A0B4J1U4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRGV5A0A0B4J1U4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.07■■□□□ 1.44
TRGV5A0A0B4J1U4 AC108673.1-201ENST00000510422 1159 ntBASIC24.07■■□□□ 1.44
TRGV5A0A0B4J1U4 MIR7108-201ENST00000614319 87 ntBASIC24.07■■□□□ 1.44
TRGV5A0A0B4J1U4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRGV5A0A0B4J1U4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.05■■□□□ 1.44
TRGV5A0A0B4J1U4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRGV5A0A0B4J1U4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.04■■□□□ 1.44
TRGV5A0A0B4J1U4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRGV5A0A0B4J1U4 DUX4L29-201ENST00000425409 679 ntBASIC24.03■■□□□ 1.44
TRGV5A0A0B4J1U4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TRGV5A0A0B4J1U4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.01■■□□□ 1.43
TRGV5A0A0B4J1U4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRGV5A0A0B4J1U4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRGV5A0A0B4J1U4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRGV5A0A0B4J1U4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24■■□□□ 1.43
TRGV5A0A0B4J1U4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.99■■□□□ 1.43
TRGV5A0A0B4J1U4 ZNRF2P2-203ENST00000454624 420 ntBASIC23.99■■□□□ 1.43
TRGV5A0A0B4J1U4 MIR6090-201ENST00000622481 60 ntBASIC23.99■■□□□ 1.43
TRGV5A0A0B4J1U4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.99■■□□□ 1.43
TRGV5A0A0B4J1U4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRGV5A0A0B4J1U4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.97■■□□□ 1.43
TRGV5A0A0B4J1U4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.97■■□□□ 1.43
TRGV5A0A0B4J1U4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRGV5A0A0B4J1U4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRGV5A0A0B4J1U4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.96■■□□□ 1.43
TRGV5A0A0B4J1U4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TRGV5A0A0B4J1U4 AL161658.1-201ENST00000623641 1967 ntBASIC23.96■■□□□ 1.43
TRGV5A0A0B4J1U4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.43
TRGV5A0A0B4J1U4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRGV5A0A0B4J1U4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.94■■□□□ 1.42
TRGV5A0A0B4J1U4 AC021231.2-201ENST00000594613 730 ntBASIC23.94■■□□□ 1.42
TRGV5A0A0B4J1U4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRGV5A0A0B4J1U4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRGV5A0A0B4J1U4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRGV5A0A0B4J1U4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.93■■□□□ 1.42
TRGV5A0A0B4J1U4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRGV5A0A0B4J1U4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRGV5A0A0B4J1U4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TRGV5A0A0B4J1U4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRGV5A0A0B4J1U4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRGV5A0A0B4J1U4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRGV5A0A0B4J1U4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TRGV5A0A0B4J1U4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV5A0A0B4J1U4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.9■■□□□ 1.42
TRGV5A0A0B4J1U4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV5A0A0B4J1U4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRGV5A0A0B4J1U4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRGV5A0A0B4J1U4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRGV5A0A0B4J1U4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TRGV5A0A0B4J1U4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.89■■□□□ 1.41
TRGV5A0A0B4J1U4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.88■■□□□ 1.41
TRGV5A0A0B4J1U4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRGV5A0A0B4J1U4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRGV5A0A0B4J1U4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRGV5A0A0B4J1U4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.86■■□□□ 1.41
TRGV5A0A0B4J1U4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRGV5A0A0B4J1U4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRGV5A0A0B4J1U4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRGV5A0A0B4J1U4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.85■■□□□ 1.41
TRGV5A0A0B4J1U4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRGV5A0A0B4J1U4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRGV5A0A0B4J1U4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRGV5A0A0B4J1U4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRGV5A0A0B4J1U4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TRGV5A0A0B4J1U4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRGV5A0A0B4J1U4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRGV5A0A0B4J1U4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRGV5A0A0B4J1U4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRGV5A0A0B4J1U4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRGV5A0A0B4J1U4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms