Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.47e-9■□□□□ 8.8
FUBP3Q96I24 XRCC5-206ENST00000460284 2962 ntTSL 1 (best)6.15□□□□□ -1.427e-9■□□□□ 8.8
FUBP3Q96I24 NFIA-214ENST00000496712 603 ntTSL 36.06□□□□□ -1.442e-6■□□□□ 8.8
FUBP3Q96I24 SETD2-201ENST00000330022 8172 ntTSL 1 (best)5.66□□□□□ -1.57e-9■□□□□ 8.8
FUBP3Q96I24 NOL11-208ENST00000583021 443 ntTSL 25.57□□□□□ -1.527e-9■□□□□ 8.8
FUBP3Q96I24 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.547e-9■□□□□ 8.8
FUBP3Q96I24 SETD2-204ENST00000431180 7555 ntTSL 25.32□□□□□ -1.567e-9■□□□□ 8.8
FUBP3Q96I24 NFIA-209ENST00000476646 730 ntTSL 34.8□□□□□ -1.642e-6■□□□□ 8.8
FUBP3Q96I24 SETD2-205ENST00000445387 7075 ntTSL 54.12□□□□□ -1.757e-9■□□□□ 8.8
FUBP3Q96I24 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.468e-7■□□□□ 8.7
FUBP3Q96I24 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.058e-7■□□□□ 8.7
FUBP3Q96I24 UBE2B-208ENST00000511807 818 ntTSL 311.92□□□□□ -0.58e-7■□□□□ 8.7
FUBP3Q96I24 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.628e-7■□□□□ 8.7
FUBP3Q96I24 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC9.42□□□□□ -0.98e-7■□□□□ 8.7
FUBP3Q96I24 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.61■□□□□ 0.734e-9■□□□□ 8.6
FUBP3Q96I24 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.03■□□□□ 0.324e-9■□□□□ 8.6
FUBP3Q96I24 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC11.6□□□□□ -0.552e-6■□□□□ 8.6
FUBP3Q96I24 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.753e-11■□□□□ 8.6
FUBP3Q96I24 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.48■■□□□ 1.676e-10■□□□□ 8.6
FUBP3Q96I24 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.836e-10■□□□□ 8.6
FUBP3Q96I24 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.26■□□□□ 0.516e-10■□□□□ 8.6
FUBP3Q96I24 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.226e-10■□□□□ 8.6
FUBP3Q96I24 SLC38A2-204ENST00000548111 583 ntTSL 47.4□□□□□ -1.222e-11■□□□□ 8.6
FUBP3Q96I24 SLC38A2-211ENST00000552414 566 ntTSL 36.89□□□□□ -1.312e-11■□□□□ 8.6
FUBP3Q96I24 SLC38A2-205ENST00000548236 865 ntTSL 26.08□□□□□ -1.442e-11■□□□□ 8.6
FUBP3Q96I24 SLC38A2-207ENST00000548870 576 ntTSL 25.21□□□□□ -1.582e-11■□□□□ 8.6
FUBP3Q96I24 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.69□□□□□ -1.662e-11■□□□□ 8.6
FUBP3Q96I24 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.871e-8■□□□□ 8.5
FUBP3Q96I24 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.191e-8■□□□□ 8.5
FUBP3Q96I24 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.553e-7■□□□□ 8.5
FUBP3Q96I24 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.443e-7■□□□□ 8.5
FUBP3Q96I24 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.233e-7■□□□□ 8.5
FUBP3Q96I24 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.343e-7■□□□□ 8.5
FUBP3Q96I24 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.673e-7■□□□□ 8.5
FUBP3Q96I24 PCLAF-206ENST00000559280 748 ntTSL 210.58□□□□□ -0.723e-7■□□□□ 8.5
FUBP3Q96I24 PCLAF-208ENST00000560234 690 ntTSL 210.45□□□□□ -0.743e-7■□□□□ 8.5
FUBP3Q96I24 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.434e-11■□□□□ 8.5
FUBP3Q96I24 MRPL42-210ENST00000552938 999 ntTSL 211.3□□□□□ -0.63e-6■□□□□ 8.4
FUBP3Q96I24 MRPL42-201ENST00000358678 2105 ntTSL 1 (best)5.53□□□□□ -1.523e-6■□□□□ 8.4
FUBP3Q96I24 MRPL42-205ENST00000549561 775 ntTSL 35.02□□□□□ -1.613e-6■□□□□ 8.4
FUBP3Q96I24 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.733e-6■□□□□ 8.4
FUBP3Q96I24 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.95□□□□□ -1.943e-6■□□□□ 8.4
FUBP3Q96I24 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.79■■■□□ 2.21e-7■□□□□ 8.4
FUBP3Q96I24 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-7■□□□□ 8.4
FUBP3Q96I24 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.31e-7■□□□□ 8.4
FUBP3Q96I24 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-7■□□□□ 8.4
FUBP3Q96I24 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.021e-7■□□□□ 8.4
FUBP3Q96I24 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.491e-7■□□□□ 8.4
FUBP3Q96I24 RNASE4-201ENST00000397995 853 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.881e-7■□□□□ 8.4
FUBP3Q96I24 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.716e-10■□□□□ 8.4
FUBP3Q96I24 ELK4-204ENST00000616704 2535 ntTSL 224.49■■□□□ 1.513e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.87■■□□□ 1.253e-6■□□□□ 8.4
FUBP3Q96I24 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.413e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-207ENST00000469491 2916 ntTSL 217.47■□□□□ 0.393e-6■□□□□ 8.4
FUBP3Q96I24 UBOX5-203ENST00000449731 524 ntTSL 517.44■□□□□ 0.383e-6■□□□□ 8.4
FUBP3Q96I24 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.23e-6■□□□□ 8.4
FUBP3Q96I24 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.28■□□□□ 0.23e-6■□□□□ 8.4
FUBP3Q96I24 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.123e-6■□□□□ 8.4
FUBP3Q96I24 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.053e-6■□□□□ 8.4
FUBP3Q96I24 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.053e-6■□□□□ 8.4
FUBP3Q96I24 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.283e-6■□□□□ 8.4
FUBP3Q96I24 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.393e-6■□□□□ 8.4
FUBP3Q96I24 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.423e-6■□□□□ 8.4
FUBP3Q96I24 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.443e-6■□□□□ 8.4
FUBP3Q96I24 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.563e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.53□□□□□ -1.043e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-206ENST00000443501 678 ntTSL 38.51□□□□□ -1.053e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.13e-6■□□□□ 8.4
FUBP3Q96I24 MARCH6-210ENST00000511802 4734 ntTSL 27.96□□□□□ -1.143e-6■□□□□ 8.4
FUBP3Q96I24 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.27□□□□□ -1.573e-6■□□□□ 8.4
FUBP3Q96I24 UBE2D1-203ENST00000606483 1388 nt5.09□□□□□ -1.593e-6■□□□□ 8.4
FUBP3Q96I24 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.623e-6■□□□□ 8.4
FUBP3Q96I24 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.733e-6■□□□□ 8.4
FUBP3Q96I24 FNDC3B-209ENST00000478016 554 ntTSL 43.73□□□□□ -1.813e-6■□□□□ 8.4
FUBP3Q96I24 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC12.33□□□□□ -0.442e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC10.79□□□□□ -0.682e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC9.97□□□□□ -0.812e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC9.13□□□□□ -0.952e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.16□□□□□ -1.422e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.16□□□□□ -1.422e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.12□□□□□ -1.592e-7■□□□□ 8.4
FUBP3Q96I24 CTAGE5-209ENST00000553383 1010 ntTSL 24.87□□□□□ -1.632e-7■□□□□ 8.4
FUBP3Q96I24 HLF-209ENST00000575307 582 ntTSL 211.15□□□□□ -0.626e-32■□□□□ 8.4
FUBP3Q96I24 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.262e-25■□□□□ 8.3
FUBP3Q96I24 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.23e-13■□□□□ 8.3
FUBP3Q96I24 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.172e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.322e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-207ENST00000465604 2947 ntTSL 1 (best)4.21□□□□□ -1.742e-25■□□□□ 8.3
FUBP3Q96I24 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-15■□□□□ 8.3
FUBP3Q96I24 ACTR3-205ENST00000478928 5965 ntTSL 23.3□□□□□ -1.882e-15■□□□□ 8.3
FUBP3Q96I24 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.57■■□□□ 1.527e-11■□□□□ 8.3
FUBP3Q96I24 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.197e-11■□□□□ 8.3
FUBP3Q96I24 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.677e-11■□□□□ 8.3
FUBP3Q96I24 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.641e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.371e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.471e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.531e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-228ENST00000509142 3861 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.641e-8■□□□□ 8.3
Retrieved 100 of 4,568 protein–RNA pairs in 102.4 ms