RNA–Protein interactions for RNA: ENST00000373910.8

UBE2D1-201, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D1, Length 2,659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-201ENST00000373910 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
UBE2D1-201ENST00000373910 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
UBE2D1-201ENST00000373910 ZCCHC6Q5VYS8 1495 aaKnown RBP27.66■■■□□ 2.02
UBE2D1-201ENST00000373910 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
UBE2D1-201ENST00000373910 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
UBE2D1-201ENST00000373910 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
UBE2D1-201ENST00000373910 ABCC9O60706 1549 aa26.82■■□□□ 1.88
UBE2D1-201ENST00000373910 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
UBE2D1-201ENST00000373910 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
UBE2D1-201ENST00000373910 SCRIBQ14160 1630 aa26.39■■□□□ 1.81
UBE2D1-201ENST00000373910 NACADO15069 1562 aa26.32■■□□□ 1.8
UBE2D1-201ENST00000373910 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
UBE2D1-201ENST00000373910 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
UBE2D1-201ENST00000373910 CECR2Q9BXF3 1484 aa25.7■■□□□ 1.7
UBE2D1-201ENST00000373910 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
UBE2D1-201ENST00000373910 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
UBE2D1-201ENST00000373910 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
UBE2D1-201ENST00000373910 PABPN1Q86U42 306 aaKnown RBP eCLIP25.5■■□□□ 1.67
UBE2D1-201ENST00000373910 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
UBE2D1-201ENST00000373910 WIZO95785 1651 aa25.36■■□□□ 1.65
UBE2D1-201ENST00000373910 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
UBE2D1-201ENST00000373910 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
UBE2D1-201ENST00000373910 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
UBE2D1-201ENST00000373910 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
UBE2D1-201ENST00000373910 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
UBE2D1-201ENST00000373910 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
UBE2D1-201ENST00000373910 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
UBE2D1-201ENST00000373910 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
UBE2D1-201ENST00000373910 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
UBE2D1-201ENST00000373910 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
UBE2D1-201ENST00000373910 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
UBE2D1-201ENST00000373910 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
UBE2D1-201ENST00000373910 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
UBE2D1-201ENST00000373910 HRCP23327 699 aa24.46■■□□□ 1.51
UBE2D1-201ENST00000373910 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
UBE2D1-201ENST00000373910 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
UBE2D1-201ENST00000373910 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
UBE2D1-201ENST00000373910 WRNQ14191 1432 aaPredicted RBP eCLIP24.19■■□□□ 1.46
UBE2D1-201ENST00000373910 SOGA1O94964 1423 aa24.15■■□□□ 1.46
UBE2D1-201ENST00000373910 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
UBE2D1-201ENST00000373910 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
UBE2D1-201ENST00000373910 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
UBE2D1-201ENST00000373910 PPARGC1BQ86YN6 1023 aaKnown RBP24.03■■□□□ 1.44
UBE2D1-201ENST00000373910 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
UBE2D1-201ENST00000373910 CFTRP13569 1480 aa23.96■■□□□ 1.43
UBE2D1-201ENST00000373910 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
UBE2D1-201ENST00000373910 EEA1Q15075 1411 aa23.87■■□□□ 1.41
UBE2D1-201ENST00000373910 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
UBE2D1-201ENST00000373910 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
UBE2D1-201ENST00000373910 CUX1P39880 1505 aa23.81■■□□□ 1.4
UBE2D1-201ENST00000373910 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
UBE2D1-201ENST00000373910 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
UBE2D1-201ENST00000373910 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
UBE2D1-201ENST00000373910 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
UBE2D1-201ENST00000373910 TNIKQ9UKE5 1360 aa23.69■■□□□ 1.38
UBE2D1-201ENST00000373910 TRIM26Q12899 539 aaPredicted RBP23.69■■□□□ 1.38
UBE2D1-201ENST00000373910 NESP48681 1621 aa23.68■■□□□ 1.38
UBE2D1-201ENST00000373910 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
UBE2D1-201ENST00000373910 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
UBE2D1-201ENST00000373910 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
UBE2D1-201ENST00000373910 FANCD2Q9BXW9 1451 aa23.6■■□□□ 1.37
UBE2D1-201ENST00000373910 KIF21BO75037 1637 aa23.59■■□□□ 1.37
UBE2D1-201ENST00000373910 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
UBE2D1-201ENST00000373910 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
UBE2D1-201ENST00000373910 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
UBE2D1-201ENST00000373910 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
UBE2D1-201ENST00000373910 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
UBE2D1-201ENST00000373910 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
UBE2D1-201ENST00000373910 CUX2O14529 1486 aa23.44■■□□□ 1.34
UBE2D1-201ENST00000373910 PRXQ9BXM0 1461 aa23.44■■□□□ 1.34
UBE2D1-201ENST00000373910 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
UBE2D1-201ENST00000373910 CLIP1P30622 1438 aa23.39■■□□□ 1.34
UBE2D1-201ENST00000373910 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
UBE2D1-201ENST00000373910 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
UBE2D1-201ENST00000373910 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
UBE2D1-201ENST00000373910 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
UBE2D1-201ENST00000373910 IGF1RP08069 1367 aa23.33■■□□□ 1.33
UBE2D1-201ENST00000373910 POLA1P09884 1462 aaPredicted RBP23.32■■□□□ 1.32
UBE2D1-201ENST00000373910 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
UBE2D1-201ENST00000373910 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
UBE2D1-201ENST00000373910 KIF21AQ7Z4S6 1674 aa23.26■■□□□ 1.31
UBE2D1-201ENST00000373910 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
UBE2D1-201ENST00000373910 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
UBE2D1-201ENST00000373910 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
UBE2D1-201ENST00000373910 VPS8Q8N3P4 1428 aa23.19■■□□□ 1.3
UBE2D1-201ENST00000373910 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
UBE2D1-201ENST00000373910 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
UBE2D1-201ENST00000373910 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
UBE2D1-201ENST00000373910 APLP2Q06481 763 aa23.05■■□□□ 1.28
UBE2D1-201ENST00000373910 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
UBE2D1-201ENST00000373910 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
UBE2D1-201ENST00000373910 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
UBE2D1-201ENST00000373910 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
UBE2D1-201ENST00000373910 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
UBE2D1-201ENST00000373910 P3H3Q8IVL6 736 aa22.94■■□□□ 1.26
UBE2D1-201ENST00000373910 CUL7Q14999 1698 aa22.93■■□□□ 1.26
UBE2D1-201ENST00000373910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
UBE2D1-201ENST00000373910 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
UBE2D1-201ENST00000373910 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
UBE2D1-201ENST00000373910 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms