RNA–Protein interactions for RNA: ENST00000377464.5

RERE-202, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RERE, Length 6,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-202ENST00000377464 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
RERE-202ENST00000377464 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
RERE-202ENST00000377464 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
RERE-202ENST00000377464 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
RERE-202ENST00000377464 ERICH6Q7L0X2 663 aa20.42■□□□□ 0.86
RERE-202ENST00000377464 APLP2Q06481 763 aa20.35■□□□□ 0.85
RERE-202ENST00000377464 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
RERE-202ENST00000377464 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.81
RERE-202ENST00000377464 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
RERE-202ENST00000377464 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
RERE-202ENST00000377464 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
RERE-202ENST00000377464 PCGF6Q9BYE7 350 aa19.77■□□□□ 0.76
RERE-202ENST00000377464 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.76
RERE-202ENST00000377464 ATP1B4Q9UN42 357 aaPredicted RBP19.75■□□□□ 0.75
RERE-202ENST00000377464 MYT1Q01538 1121 aa19.68■□□□□ 0.74
RERE-202ENST00000377464 NEFLP07196 543 aa19.63■□□□□ 0.73
RERE-202ENST00000377464 YTHDC1Q96MU7 727 aaKnown RBP19.51■□□□□ 0.71
RERE-202ENST00000377464 DAXXQ9UER7 740 aaPredicted RBP19.41■□□□□ 0.7
RERE-202ENST00000377464 ZEB1P37275 1124 aaPredicted RBP19.31■□□□□ 0.68
RERE-202ENST00000377464 MYT1LQ9UL68 1186 aa19.22■□□□□ 0.67
RERE-202ENST00000377464 POLR3GLQ9BT43 218 aa19.2■□□□□ 0.66
RERE-202ENST00000377464 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
RERE-202ENST00000377464 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
RERE-202ENST00000377464 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
RERE-202ENST00000377464 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
RERE-202ENST00000377464 SLC4A1APQ9BWU0 796 aaKnown RBP18.98■□□□□ 0.63
RERE-202ENST00000377464 PPARGC1BQ86YN6 1023 aaKnown RBP18.95■□□□□ 0.62
RERE-202ENST00000377464 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
RERE-202ENST00000377464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
RERE-202ENST00000377464 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
RERE-202ENST00000377464 ITGAEP38570 1179 aa18.86■□□□□ 0.61
RERE-202ENST00000377464 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
RERE-202ENST00000377464 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
RERE-202ENST00000377464 RTL5Q5HYW3 569 aaPredicted RBP18.78■□□□□ 0.6
RERE-202ENST00000377464 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
RERE-202ENST00000377464 SLC24A1O60721 1099 aa18.48■□□□□ 0.55
RERE-202ENST00000377464 ZBTB47Q9UFB7 747 aaPredicted RBP18.48■□□□□ 0.55
RERE-202ENST00000377464 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
RERE-202ENST00000377464 HRCP23327 699 aa18.4■□□□□ 0.54
RERE-202ENST00000377464 BCANQ96GW7 911 aa18.29■□□□□ 0.52
RERE-202ENST00000377464 TRIM52Q96A61 297 aa18.26■□□□□ 0.51
RERE-202ENST00000377464 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
RERE-202ENST00000377464 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.51
RERE-202ENST00000377464 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
RERE-202ENST00000377464 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
RERE-202ENST00000377464 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
RERE-202ENST00000377464 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
RERE-202ENST00000377464 NEFMP07197 916 aa18.08■□□□□ 0.49
RERE-202ENST00000377464 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
RERE-202ENST00000377464 ANP32CO43423 234 aa18.01■□□□□ 0.47
RERE-202ENST00000377464 NPM2Q86SE8 214 aaKnown RBP17.98■□□□□ 0.47
RERE-202ENST00000377464 EIF5BO60841 1220 aaKnown RBP17.97■□□□□ 0.47
RERE-202ENST00000377464 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
RERE-202ENST00000377464 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
RERE-202ENST00000377464 HSP90AA1P07900 732 aaKnown RBP17.89■□□□□ 0.45
RERE-202ENST00000377464 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
RERE-202ENST00000377464 FBLN2P98095 1184 aa17.81■□□□□ 0.44
RERE-202ENST00000377464 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
RERE-202ENST00000377464 CDK11BP21127 795 aaKnown RBP17.74■□□□□ 0.43
RERE-202ENST00000377464 ARXQ96QS3 562 aa17.69■□□□□ 0.42
RERE-202ENST00000377464 GLIPR1L2Q4G1C9 344 aa17.69■□□□□ 0.42
RERE-202ENST00000377464 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
RERE-202ENST00000377464 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
RERE-202ENST00000377464 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
RERE-202ENST00000377464 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
RERE-202ENST00000377464 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
RERE-202ENST00000377464 A0A0G2JS52 829 aa17.61■□□□□ 0.41
RERE-202ENST00000377464 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
RERE-202ENST00000377464 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
RERE-202ENST00000377464 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
RERE-202ENST00000377464 NBR1Q14596 966 aa17.52■□□□□ 0.39
RERE-202ENST00000377464 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
RERE-202ENST00000377464 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
RERE-202ENST00000377464 FKBP8Q14318 412 aa17.49■□□□□ 0.39
RERE-202ENST00000377464 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
RERE-202ENST00000377464 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
RERE-202ENST00000377464 PLEKHG5O94827 1062 aa17.42■□□□□ 0.38
RERE-202ENST00000377464 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
RERE-202ENST00000377464 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
RERE-202ENST00000377464 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
RERE-202ENST00000377464 MYH16Q9H6N6 1097 aa17.35■□□□□ 0.37
RERE-202ENST00000377464 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
RERE-202ENST00000377464 CCDC136Q96JN2 1154 aa17.32■□□□□ 0.36
RERE-202ENST00000377464 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
RERE-202ENST00000377464 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
RERE-202ENST00000377464 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
RERE-202ENST00000377464 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
RERE-202ENST00000377464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.356e-7■■□□□ 12
RERE-202ENST00000377464 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
RERE-202ENST00000377464 TRIM44Q96DX7 344 aaPredicted RBP17.26■□□□□ 0.35
RERE-202ENST00000377464 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
RERE-202ENST00000377464 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
RERE-202ENST00000377464 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
RERE-202ENST00000377464 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
RERE-202ENST00000377464 NPM1P06748 294 aaKnown RBP eCLIP17.21■□□□□ 0.35
RERE-202ENST00000377464 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.34
RERE-202ENST00000377464 PTMAP06454 111 aaKnown RBP17.2■□□□□ 0.34
RERE-202ENST00000377464 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
RERE-202ENST00000377464 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
RERE-202ENST00000377464 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms