RNA–Protein interactions for RNA: ENST00000393128.8

MRPL42-202, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene MRPL42, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-202ENST00000393128 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
MRPL42-202ENST00000393128 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
MRPL42-202ENST00000393128 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
MRPL42-202ENST00000393128 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
MRPL42-202ENST00000393128 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
MRPL42-202ENST00000393128 FOXD1Q16676 465 aa13.8□□□□□ -0.2
MRPL42-202ENST00000393128 MSH5O43196 834 aa13.45□□□□□ -0.26
MRPL42-202ENST00000393128 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
MRPL42-202ENST00000393128 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
MRPL42-202ENST00000393128 PPP6R1Q9UPN7 881 aa12.05□□□□□ -0.48
MRPL42-202ENST00000393128 ADRA2BP18089 450 aa11.95□□□□□ -0.5
MRPL42-202ENST00000393128 PLPPR3Q6T4P5 718 aa11.78□□□□□ -0.52
MRPL42-202ENST00000393128 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
MRPL42-202ENST00000393128 POTEHQ6S545 545 aa11.34□□□□□ -0.59
MRPL42-202ENST00000393128 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
MRPL42-202ENST00000393128 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
MRPL42-202ENST00000393128 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
MRPL42-202ENST00000393128 C1QBPQ07021 282 aaKnown RBP11.16□□□□□ -0.62
MRPL42-202ENST00000393128 DCAF8L1A6NGE4 600 aa10.99□□□□□ -0.65
MRPL42-202ENST00000393128 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
MRPL42-202ENST00000393128 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
MRPL42-202ENST00000393128 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
MRPL42-202ENST00000393128 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
MRPL42-202ENST00000393128 DSG3P32926 999 aa10.22□□□□□ -0.77
MRPL42-202ENST00000393128 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
MRPL42-202ENST00000393128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.18□□□□□ -0.788e-10■■■□□ 17.4
MRPL42-202ENST00000393128 PPP4R3CPQ6ZMV5 832 aa10.12□□□□□ -0.79
MRPL42-202ENST00000393128 CAPN15O75808 1086 aa10.01□□□□□ -0.81
MRPL42-202ENST00000393128 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
MRPL42-202ENST00000393128 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
MRPL42-202ENST00000393128 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
MRPL42-202ENST00000393128 U3KPZ7 1027 aaPredicted RBP9.83□□□□□ -0.84
MRPL42-202ENST00000393128 APLP2Q06481 763 aa9.68□□□□□ -0.86
MRPL42-202ENST00000393128 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
MRPL42-202ENST00000393128 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
MRPL42-202ENST00000393128 ABCB7O75027 752 aa9.61□□□□□ -0.87
MRPL42-202ENST00000393128 HAX1O00165 279 aa9.59□□□□□ -0.87
MRPL42-202ENST00000393128 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
MRPL42-202ENST00000393128 NCBP3Q53F19 620 aaKnown RBP9.54□□□□□ -0.88
MRPL42-202ENST00000393128 LHX8Q68G74 356 aa9.52□□□□□ -0.89
MRPL42-202ENST00000393128 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
MRPL42-202ENST00000393128 AKT1S1Q96B36 256 aa9.43□□□□□ -0.9
MRPL42-202ENST00000393128 NPM3O75607 178 aaKnown RBP9.39□□□□□ -0.91
MRPL42-202ENST00000393128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
MRPL42-202ENST00000393128 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
MRPL42-202ENST00000393128 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
MRPL42-202ENST00000393128 EVX2Q03828 476 aa9.3□□□□□ -0.92
MRPL42-202ENST00000393128 REM2Q8IYK8 340 aaPredicted RBP9.26□□□□□ -0.93
MRPL42-202ENST00000393128 SAMD1Q6SPF0 538 aaPredicted RBP9.23□□□□□ -0.93
MRPL42-202ENST00000393128 KCNA4P22459 653 aa9.22□□□□□ -0.93
MRPL42-202ENST00000393128 PITPNM1O00562 1244 aa9.15□□□□□ -0.95
MRPL42-202ENST00000393128 GABBR2O75899 941 aa9.14□□□□□ -0.95
MRPL42-202ENST00000393128 POLA2Q14181 598 aa9.12□□□□□ -0.95
MRPL42-202ENST00000393128 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
MRPL42-202ENST00000393128 SLC4A2P04920 1241 aa9.09□□□□□ -0.95
MRPL42-202ENST00000393128 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
MRPL42-202ENST00000393128 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
MRPL42-202ENST00000393128 POTEMA6NI47 508 aa8.99□□□□□ -0.97
MRPL42-202ENST00000393128 POTEGQ6S5H5 508 aa8.93□□□□□ -0.98
MRPL42-202ENST00000393128 PRKAR2AP13861 404 aaKnown RBP8.9□□□□□ -0.98
MRPL42-202ENST00000393128 CLCN6P51797 869 aa8.9□□□□□ -0.99
MRPL42-202ENST00000393128 POTEIP0CG38 1075 aa8.89□□□□□ -0.99
MRPL42-202ENST00000393128 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
MRPL42-202ENST00000393128 OTUD5Q96G74 571 aa8.78□□□□□ -1
MRPL42-202ENST00000393128 DCBLD2Q96PD2 775 aa8.71□□□□□ -1.02
MRPL42-202ENST00000393128 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
MRPL42-202ENST00000393128 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
MRPL42-202ENST00000393128 SLC4A1APQ9BWU0 796 aaKnown RBP8.63□□□□□ -1.03
MRPL42-202ENST00000393128 SPDYE2BA6NHP3 402 aa8.62□□□□□ -1.03
MRPL42-202ENST00000393128 SPDYE6P0CI01 402 aa8.62□□□□□ -1.03
MRPL42-202ENST00000393128 SPDYE2Q495Y8 402 aa8.62□□□□□ -1.03
MRPL42-202ENST00000393128 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
MRPL42-202ENST00000393128 CD44P16070 742 aaKnown RBP8.57□□□□□ -1.04
MRPL42-202ENST00000393128 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
MRPL42-202ENST00000393128 ZBTB22O15209 634 aa8.54□□□□□ -1.04
MRPL42-202ENST00000393128 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
MRPL42-202ENST00000393128 FOXD4L1Q9NU39 408 aa8.51□□□□□ -1.05
MRPL42-202ENST00000393128 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
MRPL42-202ENST00000393128 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
MRPL42-202ENST00000393128 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
MRPL42-202ENST00000393128 ZNF579Q8NAF0 562 aaKnown RBP8.46□□□□□ -1.05
MRPL42-202ENST00000393128 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.06
MRPL42-202ENST00000393128 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
MRPL42-202ENST00000393128 CDAN1Q8IWY9 1227 aa8.39□□□□□ -1.07
MRPL42-202ENST00000393128 FARP1Q9Y4F1 1045 aaPredicted RBP8.39□□□□□ -1.07
MRPL42-202ENST00000393128 SSUH2Q9Y2M2 353 aa8.35□□□□□ -1.07
MRPL42-202ENST00000393128 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
MRPL42-202ENST00000393128 FBLN2P98095 1184 aa8.31□□□□□ -1.08
MRPL42-202ENST00000393128 GALR2O43603 387 aaPredicted RBP8.31□□□□□ -1.08
MRPL42-202ENST00000393128 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
MRPL42-202ENST00000393128 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
MRPL42-202ENST00000393128 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
MRPL42-202ENST00000393128 C7P10643 843 aa8.27□□□□□ -1.09
MRPL42-202ENST00000393128 ZNF692Q9BU19 519 aaPredicted RBP8.26□□□□□ -1.09
MRPL42-202ENST00000393128 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
MRPL42-202ENST00000393128 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
MRPL42-202ENST00000393128 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
MRPL42-202ENST00000393128 METRNQ9UJH8 293 aa8.25□□□□□ -1.09
MRPL42-202ENST00000393128 PELP1Q8IZL8 1130 aaKnown RBP8.22□□□□□ -1.09
MRPL42-202ENST00000393128 SPNS2Q8IVW8 549 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms