RNA–Protein interactions for RNA: ENST00000549982.5

MRPL42-206, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MRPL42, Length 15,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-206ENST00000549982 NISCHQ9Y2I1 1504 aa8.01□□□□□ -1.13
MRPL42-206ENST00000549982 DCAF8L2P0C7V8 631 aa7.36□□□□□ -1.23
MRPL42-206ENST00000549982 SUPT5HO00267 1087 aaKnown RBP7.01□□□□□ -1.29
MRPL42-206ENST00000549982 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
MRPL42-206ENST00000549982 CCDC180Q9P1Z9 1646 aa6.85□□□□□ -1.31
MRPL42-206ENST00000549982 ZCCHC6Q5VYS8 1495 aaKnown RBP6.68□□□□□ -1.34
MRPL42-206ENST00000549982 ABCC9O60706 1549 aa6.66□□□□□ -1.34
MRPL42-206ENST00000549982 TRIM41Q8WV44 630 aa6.62□□□□□ -1.35
MRPL42-206ENST00000549982 APLP2Q06481 763 aa6.56□□□□□ -1.36
MRPL42-206ENST00000549982 FAM9AQ8IZU1 332 aaPredicted RBP6.55□□□□□ -1.36
MRPL42-206ENST00000549982 DCAF1Q9Y4B6 1507 aa6.53□□□□□ -1.36
MRPL42-206ENST00000549982 EHMT2Q96KQ7 1210 aa6.51□□□□□ -1.37
MRPL42-206ENST00000549982 RB1CC1Q8TDY2 1594 aa6.5□□□□□ -1.37
MRPL42-206ENST00000549982 NACADO15069 1562 aa6.5□□□□□ -1.37
MRPL42-206ENST00000549982 SCRIBQ14160 1630 aa6.48□□□□□ -1.37
MRPL42-206ENST00000549982 CHIC1Q5VXU3 224 aa6.44□□□□□ -1.38
MRPL42-206ENST00000549982 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
MRPL42-206ENST00000549982 ZEB1P37275 1124 aaPredicted RBP6.41□□□□□ -1.38
MRPL42-206ENST00000549982 PABPN1Q86U42 306 aaKnown RBP eCLIP6.4□□□□□ -1.38
MRPL42-206ENST00000549982 MYO15BQ96JP2 1530 aa6.39□□□□□ -1.39
MRPL42-206ENST00000549982 PCGF6Q9BYE7 350 aa6.38□□□□□ -1.39
MRPL42-206ENST00000549982 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
MRPL42-206ENST00000549982 ATP1B4Q9UN42 357 aaPredicted RBP6.31□□□□□ -1.4
MRPL42-206ENST00000549982 CCER1Q8TC90 406 aaPredicted RBP6.31□□□□□ -1.4
MRPL42-206ENST00000549982 RANGAP1P46060 587 aaPredicted RBP6.31□□□□□ -1.4
MRPL42-206ENST00000549982 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
MRPL42-206ENST00000549982 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
MRPL42-206ENST00000549982 RSF1Q96T23 1441 aaPredicted RBP6.28□□□□□ -1.4
MRPL42-206ENST00000549982 TTBK1Q5TCY1 1321 aaPredicted RBP6.26□□□□□ -1.41
MRPL42-206ENST00000549982 CSRNP3Q8WYN3 585 aa6.2□□□□□ -1.42
MRPL42-206ENST00000549982 BAZ1BQ9UIG0 1483 aaKnown RBP6.19□□□□□ -1.42
MRPL42-206ENST00000549982 PELP1Q8IZL8 1130 aaKnown RBP6.18□□□□□ -1.42
MRPL42-206ENST00000549982 EEA1Q15075 1411 aa6.16□□□□□ -1.42
MRPL42-206ENST00000549982 PPARGC1BQ86YN6 1023 aaKnown RBP6.16□□□□□ -1.42
MRPL42-206ENST00000549982 SMARCA2P51531 1590 aa6.16□□□□□ -1.42
MRPL42-206ENST00000549982 CECR2Q9BXF3 1484 aa6.16□□□□□ -1.42
MRPL42-206ENST00000549982 HRCP23327 699 aa6.16□□□□□ -1.42
MRPL42-206ENST00000549982 MROH2BQ7Z745 1585 aa6.14□□□□□ -1.43
MRPL42-206ENST00000549982 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.14□□□□□ -1.43
MRPL42-206ENST00000549982 HNRNPUL2Q1KMD3 747 aaKnown RBP6.14□□□□□ -1.43
MRPL42-206ENST00000549982 CENPBP07199 599 aaPredicted RBP6.13□□□□□ -1.43
MRPL42-206ENST00000549982 WIZO95785 1651 aa6.11□□□□□ -1.43
MRPL42-206ENST00000549982 WRNQ14191 1432 aaPredicted RBP eCLIP6.11□□□□□ -1.43
MRPL42-206ENST00000549982 TOP2AP11388 1531 aaKnown RBP6.1□□□□□ -1.43
MRPL42-206ENST00000549982 SMARCA4P51532 1647 aa6.09□□□□□ -1.43
MRPL42-206ENST00000549982 GOLGA3Q08378 1498 aa6.09□□□□□ -1.44
MRPL42-206ENST00000549982 ITGAEP38570 1179 aa6.08□□□□□ -1.44
MRPL42-206ENST00000549982 CCDC88BA6NC98 1476 aa6.07□□□□□ -1.44
MRPL42-206ENST00000549982 FAM50AQ14320 339 aaKnown RBP6.06□□□□□ -1.44
MRPL42-206ENST00000549982 CEP164Q9UPV0 1460 aa6.06□□□□□ -1.44
MRPL42-206ENST00000549982 KIF27Q86VH2 1401 aa6.04□□□□□ -1.44
MRPL42-206ENST00000549982 MYT1LQ9UL68 1186 aa6.04□□□□□ -1.44
MRPL42-206ENST00000549982 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
MRPL42-206ENST00000549982 FBLN2P98095 1184 aa6.03□□□□□ -1.44
MRPL42-206ENST00000549982 ATAD2BQ9ULI0 1458 aa6.03□□□□□ -1.44
MRPL42-206ENST00000549982 TNIKQ9UKE5 1360 aa6.02□□□□□ -1.45
MRPL42-206ENST00000549982 CEP162Q5TB80 1403 aa6□□□□□ -1.45
MRPL42-206ENST00000549982 P3H3Q8IVL6 736 aa5.99□□□□□ -1.45
MRPL42-206ENST00000549982 CLIP1P30622 1438 aa5.98□□□□□ -1.45
MRPL42-206ENST00000549982 PDS5BQ9NTI5 1447 aa5.98□□□□□ -1.45
MRPL42-206ENST00000549982 TRIM52Q96A61 297 aa5.98□□□□□ -1.45
MRPL42-206ENST00000549982 DIEXFQ68CQ4 756 aaKnown RBP5.97□□□□□ -1.45
MRPL42-206ENST00000549982 ACIN1Q9UKV3 1341 aaKnown RBP5.97□□□□□ -1.45
MRPL42-206ENST00000549982 ABCC8Q09428 1581 aa5.96□□□□□ -1.45
MRPL42-206ENST00000549982 CHMP7Q8WUX9 453 aaPredicted RBP5.96□□□□□ -1.46
MRPL42-206ENST00000549982 EIF4G1Q04637 1599 aaKnown RBP5.95□□□□□ -1.46
MRPL42-206ENST00000549982 ERCC6Q03468 1493 aa5.95□□□□□ -1.46
MRPL42-206ENST00000549982 CADPSQ9ULU8 1353 aa5.94□□□□□ -1.46
MRPL42-206ENST00000549982 NCAPD3P42695 1498 aa5.94□□□□□ -1.46
MRPL42-206ENST00000549982 FHAD1B1AJZ9 1412 aa5.94□□□□□ -1.46
MRPL42-206ENST00000549982 CUX2O14529 1486 aa5.94□□□□□ -1.46
MRPL42-206ENST00000549982 NEFLP07196 543 aa5.93□□□□□ -1.46
MRPL42-206ENST00000549982 MTUS2Q5JR59 1369 aa5.93□□□□□ -1.46
MRPL42-206ENST00000549982 SOGA1O94964 1423 aa5.93□□□□□ -1.46
MRPL42-206ENST00000549982 ZNF316A6NFI3 1004 aaPredicted RBP5.92□□□□□ -1.46
MRPL42-206ENST00000549982 NEUROD1Q13562 356 aa5.91□□□□□ -1.46
MRPL42-206ENST00000549982 NPM1P06748 294 aaKnown RBP eCLIP5.91□□□□□ -1.46
MRPL42-206ENST00000549982 CARMIL1Q5VZK9 1371 aa5.9□□□□□ -1.46
MRPL42-206ENST00000549982 HMGXB3Q12766 1538 aa5.9□□□□□ -1.46
MRPL42-206ENST00000549982 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
MRPL42-206ENST00000549982 BICRAQ9NZM4 1560 aa5.89□□□□□ -1.47
MRPL42-206ENST00000549982 ZNF777Q9ULD5 760 aaPredicted RBP5.88□□□□□ -1.47
MRPL42-206ENST00000549982 FANCD2Q9BXW9 1451 aa5.88□□□□□ -1.47
MRPL42-206ENST00000549982 PEG3Q9GZU2 1588 aa5.88□□□□□ -1.47
MRPL42-206ENST00000549982 VPS8Q8N3P4 1428 aa5.87□□□□□ -1.47
MRPL42-206ENST00000549982 TSPY4P0CV99 314 aa5.87□□□□□ -1.47
MRPL42-206ENST00000549982 TSPY10P0CW01 314 aa5.87□□□□□ -1.47
MRPL42-206ENST00000549982 UNC13AQ9UPW8 1703 aa5.87□□□□□ -1.47
MRPL42-206ENST00000549982 RAPGEF2Q9Y4G8 1499 aa5.86□□□□□ -1.47
MRPL42-206ENST00000549982 POLR3GLQ9BT43 218 aa5.86□□□□□ -1.47
MRPL42-206ENST00000549982 TONSLQ96HA7 1378 aa5.86□□□□□ -1.47
MRPL42-206ENST00000549982 CLSPNQ9HAW4 1339 aa5.86□□□□□ -1.47
MRPL42-206ENST00000549982 PLEKHD1A6NEE1 506 aa5.85□□□□□ -1.47
MRPL42-206ENST00000549982 CFTRP13569 1480 aa5.85□□□□□ -1.47
MRPL42-206ENST00000549982 ANP32CO43423 234 aa5.85□□□□□ -1.47
MRPL42-206ENST00000549982 CC2D2AQ9P2K1 1620 aa5.84□□□□□ -1.47
MRPL42-206ENST00000549982 FMN1Q68DA7 1419 aa5.84□□□□□ -1.48
MRPL42-206ENST00000549982 ARID3CA6NKF2 412 aa5.84□□□□□ -1.48
MRPL42-206ENST00000549982 CARMIL2Q6F5E8 1435 aa5.84□□□□□ -1.48
MRPL42-206ENST00000549982 ERICH6Q7L0X2 663 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms