RNA–Protein interactions for RNA: ENST00000358678.7

MRPL42-201, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 1 (best)

Gene MRPL42, Length 2,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-201ENST00000358678 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
MRPL42-201ENST00000358678 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.3
MRPL42-201ENST00000358678 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
MRPL42-201ENST00000358678 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
MRPL42-201ENST00000358678 FOXD1Q16676 465 aa14.08□□□□□ -0.16
MRPL42-201ENST00000358678 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
MRPL42-201ENST00000358678 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
MRPL42-201ENST00000358678 MSH5O43196 834 aa13.49□□□□□ -0.25
MRPL42-201ENST00000358678 ADRA2BP18089 450 aa13.21□□□□□ -0.3
MRPL42-201ENST00000358678 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
MRPL42-201ENST00000358678 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
MRPL42-201ENST00000358678 KCNA4P22459 653 aa12.74□□□□□ -0.37
MRPL42-201ENST00000358678 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
MRPL42-201ENST00000358678 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
MRPL42-201ENST00000358678 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
MRPL42-201ENST00000358678 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
MRPL42-201ENST00000358678 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
MRPL42-201ENST00000358678 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
MRPL42-201ENST00000358678 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
MRPL42-201ENST00000358678 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
MRPL42-201ENST00000358678 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
MRPL42-201ENST00000358678 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
MRPL42-201ENST00000358678 ZBTB22O15209 634 aa11.82□□□□□ -0.52
MRPL42-201ENST00000358678 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
MRPL42-201ENST00000358678 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
MRPL42-201ENST00000358678 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
MRPL42-201ENST00000358678 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
MRPL42-201ENST00000358678 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
MRPL42-201ENST00000358678 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
MRPL42-201ENST00000358678 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
MRPL42-201ENST00000358678 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
MRPL42-201ENST00000358678 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
MRPL42-201ENST00000358678 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
MRPL42-201ENST00000358678 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
MRPL42-201ENST00000358678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.668e-10■■■□□ 17.4
MRPL42-201ENST00000358678 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
MRPL42-201ENST00000358678 FKBP8Q14318 412 aa10.83□□□□□ -0.68
MRPL42-201ENST00000358678 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
MRPL42-201ENST00000358678 U3KPZ7 1027 aaPredicted RBP10.78□□□□□ -0.68
MRPL42-201ENST00000358678 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
MRPL42-201ENST00000358678 SAMD1Q6SPF0 538 aaPredicted RBP10.65□□□□□ -0.7
MRPL42-201ENST00000358678 POTEHQ6S545 545 aa10.63□□□□□ -0.71
MRPL42-201ENST00000358678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
MRPL42-201ENST00000358678 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
MRPL42-201ENST00000358678 CAPN15O75808 1086 aa10.58□□□□□ -0.72
MRPL42-201ENST00000358678 SLC24A1O60721 1099 aa10.52□□□□□ -0.73
MRPL42-201ENST00000358678 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
MRPL42-201ENST00000358678 APLP2Q06481 763 aa10.51□□□□□ -0.73
MRPL42-201ENST00000358678 DSG3P32926 999 aa10.51□□□□□ -0.73
MRPL42-201ENST00000358678 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
MRPL42-201ENST00000358678 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
MRPL42-201ENST00000358678 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
MRPL42-201ENST00000358678 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
MRPL42-201ENST00000358678 PROM2Q8N271 834 aa10.3□□□□□ -0.76
MRPL42-201ENST00000358678 POLA2Q14181 598 aa10.24□□□□□ -0.77
MRPL42-201ENST00000358678 ABCB7O75027 752 aa10.22□□□□□ -0.77
MRPL42-201ENST00000358678 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
MRPL42-201ENST00000358678 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
MRPL42-201ENST00000358678 FBLN2P98095 1184 aa10.16□□□□□ -0.78
MRPL42-201ENST00000358678 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
MRPL42-201ENST00000358678 IFNLR1Q8IU57 520 aaPredicted RBP10.11□□□□□ -0.79
MRPL42-201ENST00000358678 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
MRPL42-201ENST00000358678 PKD2Q13563 968 aa9.98□□□□□ -0.81
MRPL42-201ENST00000358678 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
MRPL42-201ENST00000358678 PLCB2Q00722 1185 aa9.92□□□□□ -0.82
MRPL42-201ENST00000358678 OSCARQ8IYS5 282 aa9.9□□□□□ -0.82
MRPL42-201ENST00000358678 SSUH2Q9Y2M2 353 aa9.87□□□□□ -0.83
MRPL42-201ENST00000358678 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
MRPL42-201ENST00000358678 AKT1S1Q96B36 256 aa9.85□□□□□ -0.83
MRPL42-201ENST00000358678 SP7Q8TDD2 431 aaPredicted RBP9.83□□□□□ -0.84
MRPL42-201ENST00000358678 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
MRPL42-201ENST00000358678 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
MRPL42-201ENST00000358678 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
MRPL42-201ENST00000358678 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
MRPL42-201ENST00000358678 PABPN1Q86U42 306 aaKnown RBP eCLIP9.78□□□□□ -0.84
MRPL42-201ENST00000358678 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
MRPL42-201ENST00000358678 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
MRPL42-201ENST00000358678 STAG3Q9UJ98 1225 aa9.75□□□□□ -0.85
MRPL42-201ENST00000358678 NPM1P06748 294 aaKnown RBP eCLIP9.74□□□□□ -0.85
MRPL42-201ENST00000358678 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
MRPL42-201ENST00000358678 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
MRPL42-201ENST00000358678 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
MRPL42-201ENST00000358678 RGL2O15211 777 aa9.7□□□□□ -0.86
MRPL42-201ENST00000358678 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
MRPL42-201ENST00000358678 MIER1Q8N108 512 aa9.67□□□□□ -0.86
MRPL42-201ENST00000358678 HAX1O00165 279 aa9.66□□□□□ -0.86
MRPL42-201ENST00000358678 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
MRPL42-201ENST00000358678 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
MRPL42-201ENST00000358678 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
MRPL42-201ENST00000358678 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
MRPL42-201ENST00000358678 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
MRPL42-201ENST00000358678 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.88
MRPL42-201ENST00000358678 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
MRPL42-201ENST00000358678 CIZ1Q9ULV3 898 aaPredicted RBP9.55□□□□□ -0.88
MRPL42-201ENST00000358678 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.54□□□□□ -0.88
MRPL42-201ENST00000358678 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
MRPL42-201ENST00000358678 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.89
MRPL42-201ENST00000358678 CHGAP10645 457 aaKnown RBP9.49□□□□□ -0.89
MRPL42-201ENST00000358678 BCANQ96GW7 911 aa9.49□□□□□ -0.89
MRPL42-201ENST00000358678 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms