RNA–Protein interactions for RNA: ENST00000616704.4

ELK4-204, Transcript of ELK4, ETS transcription factor, humanhuman

TSL 2

Gene ELK4, Length 2,535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELK4-204ENST00000616704 NISCHQ9Y2I1 1504 aa52.42■■■■■ 5.98
ELK4-204ENST00000616704 CCDC180Q9P1Z9 1646 aa45.19■■■■■ 4.83
ELK4-204ENST00000616704 ZCCHC6Q5VYS8 1495 aaKnown RBP44.11■■■■■ 4.65
ELK4-204ENST00000616704 SHROOM4Q9ULL8 1493 aa43.74■■■■■ 4.59
ELK4-204ENST00000616704 DCAF8L2P0C7V8 631 aa43.7■■■■■ 4.59
ELK4-204ENST00000616704 DCAF1Q9Y4B6 1507 aa43.05■■■■■ 4.48
ELK4-204ENST00000616704 SUPT5HO00267 1087 aaKnown RBP42.88■■■■■ 4.45
ELK4-204ENST00000616704 ABCC9O60706 1549 aa42.79■■■■■ 4.44
ELK4-204ENST00000616704 MYO15BQ96JP2 1530 aa42.26■■■■■ 4.35
ELK4-204ENST00000616704 SCRIBQ14160 1630 aa42.1■■■■■ 4.33
ELK4-204ENST00000616704 NACADO15069 1562 aa42.03■■■■■ 4.32
ELK4-204ENST00000616704 CHIC1Q5VXU3 224 aa41.98■■■■■ 4.31
ELK4-204ENST00000616704 HRCP23327 699 aa41.86■■■■■ 4.29
ELK4-204ENST00000616704 RB1CC1Q8TDY2 1594 aa41.6■■■■■ 4.25
ELK4-204ENST00000616704 PCGF6Q9BYE7 350 aa41.41■■■■■ 4.22
ELK4-204ENST00000616704 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
ELK4-204ENST00000616704 RSF1Q96T23 1441 aaPredicted RBP41■■■■■ 4.15
ELK4-204ENST00000616704 CECR2Q9BXF3 1484 aa40.95■■■■■ 4.15
ELK4-204ENST00000616704 PPARGC1BQ86YN6 1023 aaKnown RBP40.95■■■■■ 4.15
ELK4-204ENST00000616704 LOC105371045A0A1W2PR82 267 aa40.82■■■■■ 4.13
ELK4-204ENST00000616704 MROH2BQ7Z745 1585 aa40.69■■■■■ 4.1
ELK4-204ENST00000616704 PABPN1Q86U42 306 aaKnown RBP eCLIP40.64■■■■■ 4.1
ELK4-204ENST00000616704 BICRAQ9NZM4 1560 aa40.51■■■■■ 4.07
ELK4-204ENST00000616704 WIZO95785 1651 aa40.42■■■■■ 4.06
ELK4-204ENST00000616704 TRIM26Q12899 539 aaPredicted RBP40.41■■■■■ 4.06
ELK4-204ENST00000616704 BAZ1AQ9NRL2 1556 aaPredicted RBP40.36■■■■■ 4.05
ELK4-204ENST00000616704 SMARCA4P51532 1647 aa40.19■■■■■ 4.02
ELK4-204ENST00000616704 TRIM41Q8WV44 630 aa39.84■■■■□ 3.97
ELK4-204ENST00000616704 ZEB1P37275 1124 aaPredicted RBP39.79■■■■□ 3.96
ELK4-204ENST00000616704 TOP2AP11388 1531 aaKnown RBP39.77■■■■□ 3.96
ELK4-204ENST00000616704 FAM9AQ8IZU1 332 aaPredicted RBP39.62■■■■□ 3.93
ELK4-204ENST00000616704 CCDC88BA6NC98 1476 aa39.55■■■■□ 3.92
ELK4-204ENST00000616704 SMARCA2P51531 1590 aa39.52■■■■□ 3.92
ELK4-204ENST00000616704 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
ELK4-204ENST00000616704 ATAD2BQ9ULI0 1458 aa39.42■■■■□ 3.9
ELK4-204ENST00000616704 EIF4G1Q04637 1599 aaKnown RBP39.36■■■■□ 3.89
ELK4-204ENST00000616704 EHMT2Q96KQ7 1210 aa39.32■■■■□ 3.89
ELK4-204ENST00000616704 BAZ1BQ9UIG0 1483 aaKnown RBP39.24■■■■□ 3.87
ELK4-204ENST00000616704 ABCC8Q09428 1581 aa39.07■■■■□ 3.85
ELK4-204ENST00000616704 SCAF1Q9H7N4 1312 aaKnown RBP39.03■■■■□ 3.84
ELK4-204ENST00000616704 PELP1Q8IZL8 1130 aaKnown RBP38.95■■■■□ 3.83
ELK4-204ENST00000616704 NCAPD3P42695 1498 aa38.87■■■■□ 3.81
ELK4-204ENST00000616704 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
ELK4-204ENST00000616704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.72■■■■□ 3.79
ELK4-204ENST00000616704 CCER1Q8TC90 406 aaPredicted RBP38.64■■■■□ 3.78
ELK4-204ENST00000616704 CC2D2AQ9P2K1 1620 aa38.57■■■■□ 3.77
ELK4-204ENST00000616704 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
ELK4-204ENST00000616704 SOGA1O94964 1423 aa38.44■■■■□ 3.74
ELK4-204ENST00000616704 SYNJ1O43426 1573 aa38.43■■■■□ 3.74
ELK4-204ENST00000616704 ACIN1Q9UKV3 1341 aaKnown RBP38.4■■■■□ 3.74
ELK4-204ENST00000616704 RUSC2Q8N2Y8 1516 aa38.33■■■■□ 3.73
ELK4-204ENST00000616704 NEUROD1Q13562 356 aa38.32■■■■□ 3.72
ELK4-204ENST00000616704 DIEXFQ68CQ4 756 aaKnown RBP38.26■■■■□ 3.71
ELK4-204ENST00000616704 TTBK1Q5TCY1 1321 aaPredicted RBP38.24■■■■□ 3.71
ELK4-204ENST00000616704 CFTRP13569 1480 aa38.23■■■■□ 3.71
ELK4-204ENST00000616704 CEP162Q5TB80 1403 aa38.22■■■■□ 3.71
ELK4-204ENST00000616704 CSRNP3Q8WYN3 585 aa38.09■■■■□ 3.69
ELK4-204ENST00000616704 TNIKQ9UKE5 1360 aa38.08■■■■□ 3.69
ELK4-204ENST00000616704 TOP2BQ02880 1626 aa38.07■■■■□ 3.68
ELK4-204ENST00000616704 CENPBP07199 599 aaPredicted RBP38.05■■■■□ 3.68
ELK4-204ENST00000616704 CADPSQ9ULU8 1353 aa38.02■■■■□ 3.68
ELK4-204ENST00000616704 EEA1Q15075 1411 aa38.02■■■■□ 3.68
ELK4-204ENST00000616704 GTF3C3Q9Y5Q9 886 aa38■■■■□ 3.67
ELK4-204ENST00000616704 BIVM-ERCC5R4GMW8 1640 aa37.96■■■■□ 3.67
ELK4-204ENST00000616704 CUX1P39880 1505 aa37.96■■■■□ 3.67
ELK4-204ENST00000616704 PRDM2Q13029 1718 aa37.92■■■■□ 3.66
ELK4-204ENST00000616704 DNAJC5BQ9UF47 199 aa37.9■■■■□ 3.66
ELK4-204ENST00000616704 UBTFP17480 764 aaKnown RBP37.87■■■■□ 3.65
ELK4-204ENST00000616704 NESP48681 1621 aa37.78■■■■□ 3.64
ELK4-204ENST00000616704 ZNF316A6NFI3 1004 aaPredicted RBP37.78■■■■□ 3.64
ELK4-204ENST00000616704 GOLGA3Q08378 1498 aa37.74■■■■□ 3.63
ELK4-204ENST00000616704 FANCD2Q9BXW9 1451 aa37.66■■■■□ 3.62
ELK4-204ENST00000616704 CEP164Q9UPV0 1460 aa37.63■■■■□ 3.62
ELK4-204ENST00000616704 KIF21BO75037 1637 aa37.61■■■■□ 3.61
ELK4-204ENST00000616704 RAPGEF2Q9Y4G8 1499 aa37.57■■■■□ 3.6
ELK4-204ENST00000616704 HNRNPUL2Q1KMD3 747 aaKnown RBP37.47■■■■□ 3.59
ELK4-204ENST00000616704 FGD5Q6ZNL6 1462 aa37.47■■■■□ 3.59
ELK4-204ENST00000616704 KIF27Q86VH2 1401 aa37.45■■■■□ 3.59
ELK4-204ENST00000616704 YTHDC1Q96MU7 727 aaKnown RBP37.45■■■■□ 3.59
ELK4-204ENST00000616704 LAMC3Q9Y6N6 1575 aa37.42■■■■□ 3.58
ELK4-204ENST00000616704 RANGAP1P46060 587 aaPredicted RBP37.38■■■■□ 3.57
ELK4-204ENST00000616704 CLIP1P30622 1438 aa37.36■■■■□ 3.57
ELK4-204ENST00000616704 MIER1Q8N108 512 aa37.36■■■■□ 3.57
ELK4-204ENST00000616704 CUX2O14529 1486 aa37.36■■■■□ 3.57
ELK4-204ENST00000616704 PRXQ9BXM0 1461 aa37.34■■■■□ 3.57
ELK4-204ENST00000616704 TOPBP1Q92547 1522 aa37.29■■■■□ 3.56
ELK4-204ENST00000616704 DNMBPQ6XZF7 1577 aa37.29■■■■□ 3.56
ELK4-204ENST00000616704 VPS8Q8N3P4 1428 aa37.27■■■■□ 3.56
ELK4-204ENST00000616704 RAD54L2Q9Y4B4 1467 aa37.23■■■■□ 3.55
ELK4-204ENST00000616704 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
ELK4-204ENST00000616704 URB2Q14146 1524 aaKnown RBP37.19■■■■□ 3.54
ELK4-204ENST00000616704 POLA1P09884 1462 aaPredicted RBP37.19■■■■□ 3.54
ELK4-204ENST00000616704 PDS5BQ9NTI5 1447 aa37.19■■■■□ 3.54
ELK4-204ENST00000616704 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
ELK4-204ENST00000616704 IGF1RP08069 1367 aa37.17■■■■□ 3.54
ELK4-204ENST00000616704 APLP2Q06481 763 aa37.15■■■■□ 3.54
ELK4-204ENST00000616704 MYT1Q01538 1121 aa37.13■■■■□ 3.53
ELK4-204ENST00000616704 ABCA10Q8WWZ4 1543 aa37■■■■□ 3.51
ELK4-204ENST00000616704 CARMIL1Q5VZK9 1371 aa36.98■■■■□ 3.51
ELK4-204ENST00000616704 TDRD9Q8NDG6 1382 aaKnown RBP36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms