RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 DCAF8L2P0C7V8 631 aa21.99■■□□□ 1.11
ACTR3-201ENST00000263238 SUPT5HO00267 1087 aaKnown RBP21.73■■□□□ 1.07
ACTR3-201ENST00000263238 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
ACTR3-201ENST00000263238 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
ACTR3-201ENST00000263238 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.98
ACTR3-201ENST00000263238 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
ACTR3-201ENST00000263238 NISCHQ9Y2I1 1504 aa20.97■□□□□ 0.95
ACTR3-201ENST00000263238 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
ACTR3-201ENST00000263238 CENPBP07199 599 aaPredicted RBP20.6■□□□□ 0.89
ACTR3-201ENST00000263238 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
ACTR3-201ENST00000263238 MYT1Q01538 1121 aa20.53■□□□□ 0.88
ACTR3-201ENST00000263238 ERICH6Q7L0X2 663 aa20.46■□□□□ 0.87
ACTR3-201ENST00000263238 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
ACTR3-201ENST00000263238 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
ACTR3-201ENST00000263238 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
ACTR3-201ENST00000263238 HRCP23327 699 aa20.32■□□□□ 0.84
ACTR3-201ENST00000263238 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
ACTR3-201ENST00000263238 APLP2Q06481 763 aa20.19■□□□□ 0.82
ACTR3-201ENST00000263238 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
ACTR3-201ENST00000263238 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
ACTR3-201ENST00000263238 TRIM41Q8WV44 630 aa19.89■□□□□ 0.78
ACTR3-201ENST00000263238 NEFLP07196 543 aa19.87■□□□□ 0.77
ACTR3-201ENST00000263238 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
ACTR3-201ENST00000263238 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.73
ACTR3-201ENST00000263238 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.73
ACTR3-201ENST00000263238 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.72
ACTR3-201ENST00000263238 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
ACTR3-201ENST00000263238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
ACTR3-201ENST00000263238 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
ACTR3-201ENST00000263238 BCANQ96GW7 911 aa19.33■□□□□ 0.69
ACTR3-201ENST00000263238 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
ACTR3-201ENST00000263238 ITGAEP38570 1179 aa19.27■□□□□ 0.67
ACTR3-201ENST00000263238 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
ACTR3-201ENST00000263238 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
ACTR3-201ENST00000263238 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
ACTR3-201ENST00000263238 RTL5Q5HYW3 569 aaPredicted RBP19.14■□□□□ 0.66
ACTR3-201ENST00000263238 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
ACTR3-201ENST00000263238 SCAF1Q9H7N4 1312 aaKnown RBP19.05■□□□□ 0.64
ACTR3-201ENST00000263238 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
ACTR3-201ENST00000263238 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
ACTR3-201ENST00000263238 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
ACTR3-201ENST00000263238 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
ACTR3-201ENST00000263238 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
ACTR3-201ENST00000263238 FKBP8Q14318 412 aa18.66■□□□□ 0.58
ACTR3-201ENST00000263238 ANP32CO43423 234 aa18.64■□□□□ 0.57
ACTR3-201ENST00000263238 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
ACTR3-201ENST00000263238 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.57
ACTR3-201ENST00000263238 NBR1Q14596 966 aa18.55■□□□□ 0.56
ACTR3-201ENST00000263238 ANP32AP39687 249 aaKnown RBP18.5■□□□□ 0.55
ACTR3-201ENST00000263238 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
ACTR3-201ENST00000263238 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
ACTR3-201ENST00000263238 MIER1Q8N108 512 aa18.41■□□□□ 0.54
ACTR3-201ENST00000263238 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
ACTR3-201ENST00000263238 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
ACTR3-201ENST00000263238 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
ACTR3-201ENST00000263238 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.53
ACTR3-201ENST00000263238 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
ACTR3-201ENST00000263238 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
ACTR3-201ENST00000263238 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
ACTR3-201ENST00000263238 DDX10Q13206 875 aaKnown RBP18.26■□□□□ 0.51
ACTR3-201ENST00000263238 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
ACTR3-201ENST00000263238 ARXQ96QS3 562 aa18.22■□□□□ 0.51
ACTR3-201ENST00000263238 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
ACTR3-201ENST00000263238 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
ACTR3-201ENST00000263238 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
ACTR3-201ENST00000263238 GLIPR1L2Q4G1C9 344 aa18.14■□□□□ 0.49
ACTR3-201ENST00000263238 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
ACTR3-201ENST00000263238 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
ACTR3-201ENST00000263238 HIRIP3Q9BW71 556 aaPredicted RBP18.08■□□□□ 0.48
ACTR3-201ENST00000263238 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
ACTR3-201ENST00000263238 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
ACTR3-201ENST00000263238 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
ACTR3-201ENST00000263238 P3H3Q8IVL6 736 aa18■□□□□ 0.47
ACTR3-201ENST00000263238 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
ACTR3-201ENST00000263238 ANP32BQ92688 251 aaKnown RBP17.93■□□□□ 0.46
ACTR3-201ENST00000263238 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
ACTR3-201ENST00000263238 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
ACTR3-201ENST00000263238 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
ACTR3-201ENST00000263238 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
ACTR3-201ENST00000263238 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
ACTR3-201ENST00000263238 MRS2Q9HD23 443 aa17.83■□□□□ 0.45
ACTR3-201ENST00000263238 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
ACTR3-201ENST00000263238 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
ACTR3-201ENST00000263238 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
ACTR3-201ENST00000263238 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.43
ACTR3-201ENST00000263238 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
ACTR3-201ENST00000263238 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
ACTR3-201ENST00000263238 RBM19Q9Y4C8 960 aaKnown RBP17.75■□□□□ 0.43
ACTR3-201ENST00000263238 NEFMP07197 916 aa17.75■□□□□ 0.43
ACTR3-201ENST00000263238 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
ACTR3-201ENST00000263238 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
ACTR3-201ENST00000263238 DDRGK1Q96HY6 314 aa17.68■□□□□ 0.42
ACTR3-201ENST00000263238 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
ACTR3-201ENST00000263238 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
ACTR3-201ENST00000263238 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
ACTR3-201ENST00000263238 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
ACTR3-201ENST00000263238 TRIM44Q96DX7 344 aaPredicted RBP17.63■□□□□ 0.41
ACTR3-201ENST00000263238 PPP4R2Q9NY27 417 aa17.59■□□□□ 0.41
ACTR3-201ENST00000263238 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
ACTR3-201ENST00000263238 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms