RNA–Protein interactions for RNA: ENST00000369758.8

PCMTD2-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene PCMTD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD2-204ENST00000369758 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
PCMTD2-204ENST00000369758 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
PCMTD2-204ENST00000369758 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
PCMTD2-204ENST00000369758 ZCCHC6Q5VYS8 1495 aaKnown RBP24.4■■□□□ 1.5
PCMTD2-204ENST00000369758 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
PCMTD2-204ENST00000369758 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
PCMTD2-204ENST00000369758 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
PCMTD2-204ENST00000369758 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
PCMTD2-204ENST00000369758 HRCP23327 699 aa23.71■■□□□ 1.39
PCMTD2-204ENST00000369758 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
PCMTD2-204ENST00000369758 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
PCMTD2-204ENST00000369758 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
PCMTD2-204ENST00000369758 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PCMTD2-204ENST00000369758 ABCC9O60706 1549 aa23.12■■□□□ 1.29
PCMTD2-204ENST00000369758 SCRIBQ14160 1630 aa23■■□□□ 1.27
PCMTD2-204ENST00000369758 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
PCMTD2-204ENST00000369758 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
PCMTD2-204ENST00000369758 RB1CC1Q8TDY2 1594 aa22.86■■□□□ 1.25
PCMTD2-204ENST00000369758 FAM9AQ8IZU1 332 aaPredicted RBP22.74■■□□□ 1.23
PCMTD2-204ENST00000369758 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
PCMTD2-204ENST00000369758 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
PCMTD2-204ENST00000369758 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
PCMTD2-204ENST00000369758 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
PCMTD2-204ENST00000369758 WIZO95785 1651 aa22.44■■□□□ 1.18
PCMTD2-204ENST00000369758 ZEB1P37275 1124 aaPredicted RBP22.39■■□□□ 1.18
PCMTD2-204ENST00000369758 NACADO15069 1562 aa22.32■■□□□ 1.16
PCMTD2-204ENST00000369758 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
PCMTD2-204ENST00000369758 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
PCMTD2-204ENST00000369758 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
PCMTD2-204ENST00000369758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
PCMTD2-204ENST00000369758 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
PCMTD2-204ENST00000369758 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
PCMTD2-204ENST00000369758 TTBK1Q5TCY1 1321 aaPredicted RBP22■■□□□ 1.11
PCMTD2-204ENST00000369758 CCER1Q8TC90 406 aaPredicted RBP21.96■■□□□ 1.11
PCMTD2-204ENST00000369758 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
PCMTD2-204ENST00000369758 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
PCMTD2-204ENST00000369758 SMARCA2P51531 1590 aa21.89■■□□□ 1.1
PCMTD2-204ENST00000369758 SOGA1O94964 1423 aa21.88■■□□□ 1.09
PCMTD2-204ENST00000369758 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
PCMTD2-204ENST00000369758 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
PCMTD2-204ENST00000369758 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
PCMTD2-204ENST00000369758 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
PCMTD2-204ENST00000369758 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
PCMTD2-204ENST00000369758 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
PCMTD2-204ENST00000369758 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
PCMTD2-204ENST00000369758 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
PCMTD2-204ENST00000369758 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
PCMTD2-204ENST00000369758 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.05
PCMTD2-204ENST00000369758 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
PCMTD2-204ENST00000369758 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.046e-6■■□□□ 12
PCMTD2-204ENST00000369758 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
PCMTD2-204ENST00000369758 EEA1Q15075 1411 aa21.54■■□□□ 1.04
PCMTD2-204ENST00000369758 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
PCMTD2-204ENST00000369758 SYNJ1O43426 1573 aa21.5■■□□□ 1.03
PCMTD2-204ENST00000369758 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
PCMTD2-204ENST00000369758 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
PCMTD2-204ENST00000369758 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
PCMTD2-204ENST00000369758 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
PCMTD2-204ENST00000369758 KIF21BO75037 1637 aa21.37■■□□□ 1.01
PCMTD2-204ENST00000369758 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
PCMTD2-204ENST00000369758 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
PCMTD2-204ENST00000369758 CLIP1P30622 1438 aa21.34■■□□□ 1.01
PCMTD2-204ENST00000369758 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
PCMTD2-204ENST00000369758 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
PCMTD2-204ENST00000369758 RAPGEF2Q9Y4G8 1499 aa21.31■■□□□ 1
PCMTD2-204ENST00000369758 MIER1Q8N108 512 aa21.27■■□□□ 1
PCMTD2-204ENST00000369758 VPS8Q8N3P4 1428 aa21.26■□□□□ 0.99
PCMTD2-204ENST00000369758 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
PCMTD2-204ENST00000369758 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
PCMTD2-204ENST00000369758 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
PCMTD2-204ENST00000369758 APLP2Q06481 763 aa21.09■□□□□ 0.97
PCMTD2-204ENST00000369758 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
PCMTD2-204ENST00000369758 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
PCMTD2-204ENST00000369758 KANK4Q5T7N3 995 aaPredicted RBP21.01■□□□□ 0.95
PCMTD2-204ENST00000369758 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
PCMTD2-204ENST00000369758 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
PCMTD2-204ENST00000369758 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
PCMTD2-204ENST00000369758 CUX1P39880 1505 aa20.9■□□□□ 0.94
PCMTD2-204ENST00000369758 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
PCMTD2-204ENST00000369758 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
PCMTD2-204ENST00000369758 ARHGAP35Q9NRY4 1499 aa20.78■□□□□ 0.92
PCMTD2-204ENST00000369758 ITGAEP38570 1179 aa20.77■□□□□ 0.92
PCMTD2-204ENST00000369758 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
PCMTD2-204ENST00000369758 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
PCMTD2-204ENST00000369758 CUX2O14529 1486 aa20.71■□□□□ 0.91
PCMTD2-204ENST00000369758 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
PCMTD2-204ENST00000369758 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
PCMTD2-204ENST00000369758 SUPT16HQ9Y5B9 1047 aaKnown RBP20.67■□□□□ 0.9
PCMTD2-204ENST00000369758 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
PCMTD2-204ENST00000369758 CFTRP13569 1480 aa20.65■□□□□ 0.9
PCMTD2-204ENST00000369758 MAPKBP1O60336 1514 aa20.65■□□□□ 0.9
PCMTD2-204ENST00000369758 RAB3GAP2Q9H2M9 1393 aa20.62■□□□□ 0.89
PCMTD2-204ENST00000369758 TIAM1Q13009 1591 aa20.58■□□□□ 0.89
PCMTD2-204ENST00000369758 IGF1RP08069 1367 aa20.56■□□□□ 0.88
PCMTD2-204ENST00000369758 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
PCMTD2-204ENST00000369758 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
PCMTD2-204ENST00000369758 MYT1Q01538 1121 aa20.52■□□□□ 0.88
PCMTD2-204ENST00000369758 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
PCMTD2-204ENST00000369758 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
PCMTD2-204ENST00000369758 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms