RNA–Protein interactions for RNA: ENST00000399728.5

STMN1-203, Transcript of stathmin 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene STMN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STMN1-203ENST00000399728 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
STMN1-203ENST00000399728 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
STMN1-203ENST00000399728 ABCC9O60706 1549 aa30.17■■■□□ 2.42
STMN1-203ENST00000399728 ZCCHC6Q5VYS8 1495 aaKnown RBP29.68■■■□□ 2.34
STMN1-203ENST00000399728 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
STMN1-203ENST00000399728 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
STMN1-203ENST00000399728 NACADO15069 1562 aa29.07■■■□□ 2.24
STMN1-203ENST00000399728 RB1CC1Q8TDY2 1594 aa29.06■■■□□ 2.24
STMN1-203ENST00000399728 MYO15BQ96JP2 1530 aa28.93■■■□□ 2.22
STMN1-203ENST00000399728 SHROOM4Q9ULL8 1493 aa28.71■■■□□ 2.19
STMN1-203ENST00000399728 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
STMN1-203ENST00000399728 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
STMN1-203ENST00000399728 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
STMN1-203ENST00000399728 PABPN1Q86U42 306 aaKnown RBP eCLIP28.23■■■□□ 2.11
STMN1-203ENST00000399728 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
STMN1-203ENST00000399728 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
STMN1-203ENST00000399728 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.98
STMN1-203ENST00000399728 EIF4G1Q04637 1599 aaKnown RBP27.45■■□□□ 1.98
STMN1-203ENST00000399728 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.97
STMN1-203ENST00000399728 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
STMN1-203ENST00000399728 MROH2BQ7Z745 1585 aa27.29■■□□□ 1.96
STMN1-203ENST00000399728 BAZ1AQ9NRL2 1556 aaPredicted RBP27.28■■□□□ 1.96
STMN1-203ENST00000399728 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
STMN1-203ENST00000399728 WIZO95785 1651 aa27.06■■□□□ 1.92
STMN1-203ENST00000399728 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
STMN1-203ENST00000399728 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
STMN1-203ENST00000399728 SMARCA2P51531 1590 aa26.83■■□□□ 1.89
STMN1-203ENST00000399728 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
STMN1-203ENST00000399728 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
STMN1-203ENST00000399728 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
STMN1-203ENST00000399728 BAZ1BQ9UIG0 1483 aaKnown RBP26.65■■□□□ 1.86
STMN1-203ENST00000399728 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
STMN1-203ENST00000399728 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
STMN1-203ENST00000399728 NESP48681 1621 aa26.18■■□□□ 1.78
STMN1-203ENST00000399728 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
STMN1-203ENST00000399728 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
STMN1-203ENST00000399728 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
STMN1-203ENST00000399728 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
STMN1-203ENST00000399728 CFTRP13569 1480 aa25.93■■□□□ 1.74
STMN1-203ENST00000399728 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
STMN1-203ENST00000399728 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
STMN1-203ENST00000399728 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
STMN1-203ENST00000399728 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
STMN1-203ENST00000399728 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
STMN1-203ENST00000399728 THOC2Q8NI27 1593 aaKnown RBP25.73■■□□□ 1.71
STMN1-203ENST00000399728 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
STMN1-203ENST00000399728 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.71
STMN1-203ENST00000399728 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
STMN1-203ENST00000399728 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
STMN1-203ENST00000399728 CUX2O14529 1486 aa25.61■■□□□ 1.69
STMN1-203ENST00000399728 TOP2BQ02880 1626 aa25.58■■□□□ 1.68
STMN1-203ENST00000399728 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
STMN1-203ENST00000399728 WDR62O43379 1518 aa25.55■■□□□ 1.68
STMN1-203ENST00000399728 CUX1P39880 1505 aa25.52■■□□□ 1.68
STMN1-203ENST00000399728 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
STMN1-203ENST00000399728 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
STMN1-203ENST00000399728 SOGA1O94964 1423 aa25.44■■□□□ 1.66
STMN1-203ENST00000399728 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
STMN1-203ENST00000399728 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
STMN1-203ENST00000399728 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
STMN1-203ENST00000399728 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
STMN1-203ENST00000399728 EEA1Q15075 1411 aa25.34■■□□□ 1.65
STMN1-203ENST00000399728 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
STMN1-203ENST00000399728 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
STMN1-203ENST00000399728 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
STMN1-203ENST00000399728 IFT140Q96RY7 1462 aa25.14■■□□□ 1.62
STMN1-203ENST00000399728 TARBP1Q13395 1621 aaKnown RBP25.11■■□□□ 1.61
STMN1-203ENST00000399728 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
STMN1-203ENST00000399728 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.61
STMN1-203ENST00000399728 KIF21BO75037 1637 aa25.08■■□□□ 1.6
STMN1-203ENST00000399728 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
STMN1-203ENST00000399728 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
STMN1-203ENST00000399728 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
STMN1-203ENST00000399728 GOLGA3Q08378 1498 aa25■■□□□ 1.59
STMN1-203ENST00000399728 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
STMN1-203ENST00000399728 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
STMN1-203ENST00000399728 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
STMN1-203ENST00000399728 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.586e-10■■■■□ 20.3
STMN1-203ENST00000399728 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
STMN1-203ENST00000399728 RAPGEF2Q9Y4G8 1499 aa24.92■■□□□ 1.58
STMN1-203ENST00000399728 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
STMN1-203ENST00000399728 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
STMN1-203ENST00000399728 IGF1RP08069 1367 aa24.88■■□□□ 1.57
STMN1-203ENST00000399728 ABCA5Q8WWZ7 1642 aa24.85■■□□□ 1.57
STMN1-203ENST00000399728 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
STMN1-203ENST00000399728 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
STMN1-203ENST00000399728 GAPVD1Q14C86 1478 aa24.78■■□□□ 1.56
STMN1-203ENST00000399728 PBRM1Q86U86 1689 aa24.77■■□□□ 1.56
STMN1-203ENST00000399728 GRIN2BQ13224 1484 aa24.73■■□□□ 1.55
STMN1-203ENST00000399728 CUL7Q14999 1698 aa24.73■■□□□ 1.55
STMN1-203ENST00000399728 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
STMN1-203ENST00000399728 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
STMN1-203ENST00000399728 CHD1O14646 1710 aa24.67■■□□□ 1.54
STMN1-203ENST00000399728 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.54
STMN1-203ENST00000399728 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
STMN1-203ENST00000399728 FBLN2P98095 1184 aa24.6■■□□□ 1.53
STMN1-203ENST00000399728 CLIP1P30622 1438 aa24.59■■□□□ 1.53
STMN1-203ENST00000399728 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
STMN1-203ENST00000399728 SYNJ2O15056 1496 aa24.56■■□□□ 1.52
STMN1-203ENST00000399728 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms