RNA–Protein interactions for RNA: ENST00000443501.1

FNDC3B-206, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-206ENST00000443501 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
FNDC3B-206ENST00000443501 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
FNDC3B-206ENST00000443501 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
FNDC3B-206ENST00000443501 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
FNDC3B-206ENST00000443501 ABCC9O60706 1549 aa19.74■□□□□ 0.75
FNDC3B-206ENST00000443501 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
FNDC3B-206ENST00000443501 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
FNDC3B-206ENST00000443501 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
FNDC3B-206ENST00000443501 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
FNDC3B-206ENST00000443501 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
FNDC3B-206ENST00000443501 NACADO15069 1562 aa18.23■□□□□ 0.51
FNDC3B-206ENST00000443501 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
FNDC3B-206ENST00000443501 DNAJC5Q9H3Z4 198 aa18.18■□□□□ 0.5
FNDC3B-206ENST00000443501 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
FNDC3B-206ENST00000443501 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
FNDC3B-206ENST00000443501 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
FNDC3B-206ENST00000443501 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
FNDC3B-206ENST00000443501 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
FNDC3B-206ENST00000443501 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
FNDC3B-206ENST00000443501 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
FNDC3B-206ENST00000443501 FOXD1Q16676 465 aa17.67■□□□□ 0.42
FNDC3B-206ENST00000443501 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
FNDC3B-206ENST00000443501 CUX2O14529 1486 aa17.37■□□□□ 0.37
FNDC3B-206ENST00000443501 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
FNDC3B-206ENST00000443501 ADRA2BP18089 450 aa17.3■□□□□ 0.36
FNDC3B-206ENST00000443501 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
FNDC3B-206ENST00000443501 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
FNDC3B-206ENST00000443501 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
FNDC3B-206ENST00000443501 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
FNDC3B-206ENST00000443501 TRIM41Q8WV44 630 aa17■□□□□ 0.31
FNDC3B-206ENST00000443501 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
FNDC3B-206ENST00000443501 NESP48681 1621 aa16.75■□□□□ 0.27
FNDC3B-206ENST00000443501 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
FNDC3B-206ENST00000443501 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
FNDC3B-206ENST00000443501 PIAS4Q8N2W9 510 aaPredicted RBP16.67■□□□□ 0.26
FNDC3B-206ENST00000443501 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
FNDC3B-206ENST00000443501 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
FNDC3B-206ENST00000443501 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
FNDC3B-206ENST00000443501 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
FNDC3B-206ENST00000443501 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
FNDC3B-206ENST00000443501 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
FNDC3B-206ENST00000443501 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
FNDC3B-206ENST00000443501 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
FNDC3B-206ENST00000443501 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
FNDC3B-206ENST00000443501 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
FNDC3B-206ENST00000443501 WDR62O43379 1518 aa16.38■□□□□ 0.21
FNDC3B-206ENST00000443501 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
FNDC3B-206ENST00000443501 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
FNDC3B-206ENST00000443501 RIMBP3CA6NJZ7 1639 aa16.26■□□□□ 0.19
FNDC3B-206ENST00000443501 RIMBP3BA6NNM3 1639 aa16.26■□□□□ 0.19
FNDC3B-206ENST00000443501 RIMBP3Q9UFD9 1639 aa16.26■□□□□ 0.19
FNDC3B-206ENST00000443501 KCNA4P22459 653 aa16.18■□□□□ 0.18
FNDC3B-206ENST00000443501 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
FNDC3B-206ENST00000443501 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
FNDC3B-206ENST00000443501 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
FNDC3B-206ENST00000443501 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
FNDC3B-206ENST00000443501 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
FNDC3B-206ENST00000443501 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
FNDC3B-206ENST00000443501 CYB5RLQ6IPT4 315 aa16.08■□□□□ 0.16
FNDC3B-206ENST00000443501 MSH5O43196 834 aa16.03■□□□□ 0.16
FNDC3B-206ENST00000443501 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
FNDC3B-206ENST00000443501 CFTRP13569 1480 aa15.97■□□□□ 0.15
FNDC3B-206ENST00000443501 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
FNDC3B-206ENST00000443501 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
FNDC3B-206ENST00000443501 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
FNDC3B-206ENST00000443501 RSF1Q96T23 1441 aaPredicted RBP15.87■□□□□ 0.13
FNDC3B-206ENST00000443501 WIZO95785 1651 aa15.83■□□□□ 0.12
FNDC3B-206ENST00000443501 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
FNDC3B-206ENST00000443501 CHD1O14646 1710 aa15.74■□□□□ 0.11
FNDC3B-206ENST00000443501 TOPBP1Q92547 1522 aa15.7■□□□□ 0.1
FNDC3B-206ENST00000443501 FBLN2P98095 1184 aa15.7■□□□□ 0.1
FNDC3B-206ENST00000443501 AQRO60306 1485 aaKnown RBP eCLIP15.68■□□□□ 0.1
FNDC3B-206ENST00000443501 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
FNDC3B-206ENST00000443501 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
FNDC3B-206ENST00000443501 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
FNDC3B-206ENST00000443501 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
FNDC3B-206ENST00000443501 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
FNDC3B-206ENST00000443501 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
FNDC3B-206ENST00000443501 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
FNDC3B-206ENST00000443501 TARBP1Q13395 1621 aaKnown RBP15.61■□□□□ 0.09
FNDC3B-206ENST00000443501 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
FNDC3B-206ENST00000443501 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
FNDC3B-206ENST00000443501 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
FNDC3B-206ENST00000443501 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
FNDC3B-206ENST00000443501 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
FNDC3B-206ENST00000443501 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.07
FNDC3B-206ENST00000443501 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
FNDC3B-206ENST00000443501 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
FNDC3B-206ENST00000443501 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
FNDC3B-206ENST00000443501 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
FNDC3B-206ENST00000443501 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
FNDC3B-206ENST00000443501 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.06
FNDC3B-206ENST00000443501 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
FNDC3B-206ENST00000443501 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
FNDC3B-206ENST00000443501 SOGA1O94964 1423 aa15.43■□□□□ 0.06
FNDC3B-206ENST00000443501 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
FNDC3B-206ENST00000443501 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
FNDC3B-206ENST00000443501 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
FNDC3B-206ENST00000443501 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
FNDC3B-206ENST00000443501 KDM4FA0A1W2PPD8 638 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms