RNA–Protein interactions for RNA: ENST00000478928.1

ACTR3-205, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2

Gene ACTR3, Length 5,965 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-205ENST00000478928 AEBP2Q6ZN18 517 aaPredicted RBP6.34□□□□□ -1.39
ACTR3-205ENST00000478928 POTEDQ86YR6 584 aa5.81□□□□□ -1.48
ACTR3-205ENST00000478928 NISCHQ9Y2I1 1504 aa5.76□□□□□ -1.49
ACTR3-205ENST00000478928 DCAF8L2P0C7V8 631 aa5.57□□□□□ -1.52
ACTR3-205ENST00000478928 FAM9AQ8IZU1 332 aaPredicted RBP5.48□□□□□ -1.53
ACTR3-205ENST00000478928 CHIC1Q5VXU3 224 aa5.36□□□□□ -1.55
ACTR3-205ENST00000478928 ABCC9O60706 1549 aa5.3□□□□□ -1.56
ACTR3-205ENST00000478928 TRIM41Q8WV44 630 aa5.17□□□□□ -1.58
ACTR3-205ENST00000478928 SENP3Q9H4L4 574 aaPredicted RBP5.16□□□□□ -1.58
ACTR3-205ENST00000478928 FOXD1Q16676 465 aa5.15□□□□□ -1.58
ACTR3-205ENST00000478928 PABPN1Q86U42 306 aaKnown RBP eCLIP5.14□□□□□ -1.59
ACTR3-205ENST00000478928 TRHP20396 242 aaPredicted RBP5.12□□□□□ -1.59
ACTR3-205ENST00000478928 ERCC6Q03468 1493 aa5.08□□□□□ -1.6
ACTR3-205ENST00000478928 NPM1P06748 294 aaKnown RBP eCLIP5.07□□□□□ -1.6
ACTR3-205ENST00000478928 RB1CC1Q8TDY2 1594 aa5.06□□□□□ -1.6
ACTR3-205ENST00000478928 DCAF8L1A6NGE4 600 aa4.98□□□□□ -1.61
ACTR3-205ENST00000478928 DNAJC5Q9H3Z4 198 aa4.94□□□□□ -1.62
ACTR3-205ENST00000478928 DNAJC5BQ9UF47 199 aa4.94□□□□□ -1.62
ACTR3-205ENST00000478928 ESF1Q9H501 851 aaKnown RBP4.92□□□□□ -1.62
ACTR3-205ENST00000478928 MYT1LQ9UL68 1186 aa4.91□□□□□ -1.62
ACTR3-205ENST00000478928 PHF23Q9BUL5 403 aaPredicted RBP4.88□□□□□ -1.63
ACTR3-205ENST00000478928 FBLN2P98095 1184 aa4.88□□□□□ -1.63
ACTR3-205ENST00000478928 CECR2Q9BXF3 1484 aa4.88□□□□□ -1.63
ACTR3-205ENST00000478928 CHMP7Q8WUX9 453 aaPredicted RBP4.87□□□□□ -1.63
ACTR3-205ENST00000478928 OSCARQ8IYS5 282 aa4.87□□□□□ -1.63
ACTR3-205ENST00000478928 NACADO15069 1562 aa4.86□□□□□ -1.63
ACTR3-205ENST00000478928 CCDC180Q9P1Z9 1646 aa4.86□□□□□ -1.63
ACTR3-205ENST00000478928 SHROOM4Q9ULL8 1493 aa4.81□□□□□ -1.64
ACTR3-205ENST00000478928 MSH5O43196 834 aa4.81□□□□□ -1.64
ACTR3-205ENST00000478928 CUX2O14529 1486 aa4.8□□□□□ -1.64
ACTR3-205ENST00000478928 PDS5BQ9NTI5 1447 aa4.77□□□□□ -1.65
ACTR3-205ENST00000478928 ARID4BQ4LE39 1312 aaPredicted RBP4.73□□□□□ -1.65
ACTR3-205ENST00000478928 SCAF1Q9H7N4 1312 aaKnown RBP4.72□□□□□ -1.65
ACTR3-205ENST00000478928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.72□□□□□ -1.65
ACTR3-205ENST00000478928 HNRNPUL2Q1KMD3 747 aaKnown RBP4.72□□□□□ -1.65
ACTR3-205ENST00000478928 DMRT2Q9Y5R5 561 aa4.7□□□□□ -1.66
ACTR3-205ENST00000478928 CYB5RLQ6IPT4 315 aa4.67□□□□□ -1.66
ACTR3-205ENST00000478928 SCRIBQ14160 1630 aa4.66□□□□□ -1.66
ACTR3-205ENST00000478928 TTBK1Q5TCY1 1321 aaPredicted RBP4.65□□□□□ -1.67
ACTR3-205ENST00000478928 PLPPR3Q6T4P5 718 aa4.64□□□□□ -1.67
ACTR3-205ENST00000478928 EHMT2Q96KQ7 1210 aa4.64□□□□□ -1.67
ACTR3-205ENST00000478928 BCANQ96GW7 911 aa4.63□□□□□ -1.67
ACTR3-205ENST00000478928 MEX3CQ5U5Q3 659 aaKnown RBP4.62□□□□□ -1.67
ACTR3-205ENST00000478928 SF3B2Q13435 895 aaKnown RBP4.61□□□□□ -1.67
ACTR3-205ENST00000478928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.6□□□□□ -1.67
ACTR3-205ENST00000478928 HAP1P54257 671 aaPredicted RBP4.59□□□□□ -1.67
ACTR3-205ENST00000478928 DISP3Q9P2K9 1392 aa4.59□□□□□ -1.67
ACTR3-205ENST00000478928 APLP2Q06481 763 aa4.58□□□□□ -1.68
ACTR3-205ENST00000478928 BAZ1BQ9UIG0 1483 aaKnown RBP4.57□□□□□ -1.68
ACTR3-205ENST00000478928 STAG3Q9UJ98 1225 aa4.57□□□□□ -1.68
ACTR3-205ENST00000478928 SMARCA2P51531 1590 aa4.57□□□□□ -1.68
ACTR3-205ENST00000478928 ATP1B4Q9UN42 357 aaPredicted RBP4.56□□□□□ -1.68
ACTR3-205ENST00000478928 CDK11AQ9UQ88 783 aaPredicted RBP4.56□□□□□ -1.68
ACTR3-205ENST00000478928 POGZQ7Z3K3 1410 aa4.56□□□□□ -1.68
ACTR3-205ENST00000478928 FBXO41Q8TF61 875 aa4.55□□□□□ -1.68
ACTR3-205ENST00000478928 C14orf37Q86TY3 774 aa4.54□□□□□ -1.68
ACTR3-205ENST00000478928 HMGB2P26583 209 aaKnown RBP4.53□□□□□ -1.68
ACTR3-205ENST00000478928 ABCC8Q09428 1581 aa4.53□□□□□ -1.68
ACTR3-205ENST00000478928 CC2D2AQ9P2K1 1620 aa4.53□□□□□ -1.68
ACTR3-205ENST00000478928 CEP164Q9UPV0 1460 aa4.53□□□□□ -1.68
ACTR3-205ENST00000478928 FAM69CQ0P6D2 419 aa4.52□□□□□ -1.69
ACTR3-205ENST00000478928 HDGFP51858 240 aaKnown RBP4.52□□□□□ -1.69
ACTR3-205ENST00000478928 MRC2Q9UBG0 1479 aa4.52□□□□□ -1.69
ACTR3-205ENST00000478928 MYO15BQ96JP2 1530 aa4.51□□□□□ -1.69
ACTR3-205ENST00000478928 LMTK3Q96Q04 1460 aa4.5□□□□□ -1.69
ACTR3-205ENST00000478928 A0A0G2JS52 829 aa4.49□□□□□ -1.69
ACTR3-205ENST00000478928 MYT1Q01538 1121 aa4.49□□□□□ -1.69
ACTR3-205ENST00000478928 CARMIL2Q6F5E8 1435 aa4.49□□□□□ -1.69
ACTR3-205ENST00000478928 TOM1O60784 492 aa4.48□□□□□ -1.69
ACTR3-205ENST00000478928 EIF4G1Q04637 1599 aaKnown RBP4.47□□□□□ -1.69
ACTR3-205ENST00000478928 PPP1R1BQ9UD71 204 aaPredicted RBP4.46□□□□□ -1.7
ACTR3-205ENST00000478928 IFT140Q96RY7 1462 aa4.44□□□□□ -1.7
ACTR3-205ENST00000478928 TEX14Q8IWB6 1497 aa4.44□□□□□ -1.7
ACTR3-205ENST00000478928 PPP1R15AO75807 674 aaPredicted RBP4.43□□□□□ -1.7
ACTR3-205ENST00000478928 ILDR1Q86SU0 546 aaPredicted RBP4.43□□□□□ -1.7
ACTR3-205ENST00000478928 CADPSQ9ULU8 1353 aa4.43□□□□□ -1.7
ACTR3-205ENST00000478928 ZRANB1Q9UGI0 708 aa4.43□□□□□ -1.7
ACTR3-205ENST00000478928 UBAP1LF5GYI3 381 aa4.42□□□□□ -1.7
ACTR3-205ENST00000478928 SOCS7O14512 581 aa4.42□□□□□ -1.7
ACTR3-205ENST00000478928 ARID3CA6NKF2 412 aa4.41□□□□□ -1.7
ACTR3-205ENST00000478928 EID1Q9Y6B2 187 aa4.41□□□□□ -1.7
ACTR3-205ENST00000478928 SYNJ1O43426 1573 aa4.4□□□□□ -1.71
ACTR3-205ENST00000478928 LAMC3Q9Y6N6 1575 aa4.4□□□□□ -1.71
ACTR3-205ENST00000478928 KCNH8Q96L42 1107 aa4.4□□□□□ -1.71
ACTR3-205ENST00000478928 RSF1Q96T23 1441 aaPredicted RBP4.39□□□□□ -1.71
ACTR3-205ENST00000478928 PLEKHD1A6NEE1 506 aa4.39□□□□□ -1.71
ACTR3-205ENST00000478928 MLECQ14165 292 aa4.38□□□□□ -1.71
ACTR3-205ENST00000478928 CCDC9Q9Y3X0 531 aaKnown RBP4.38□□□□□ -1.71
ACTR3-205ENST00000478928 NGLY1Q96IV0 654 aa4.38□□□□□ -1.71
ACTR3-205ENST00000478928 PIP4K2BP78356 416 aa4.37□□□□□ -1.71
ACTR3-205ENST00000478928 NUTM2BA6NNL0 878 aaPredicted RBP4.37□□□□□ -1.71
ACTR3-205ENST00000478928 NUTM2EB1AL46 878 aaPredicted RBP4.37□□□□□ -1.71
ACTR3-205ENST00000478928 NUTM2DQ5VT03 806 aaPredicted RBP4.37□□□□□ -1.71
ACTR3-205ENST00000478928 NUTM2AQ8IVF1 878 aaPredicted RBP4.37□□□□□ -1.71
ACTR3-205ENST00000478928 C16orf71Q8IYS4 520 aaPredicted RBP4.37□□□□□ -1.71
ACTR3-205ENST00000478928 RNF39Q9H2S5 420 aa4.37□□□□□ -1.71
ACTR3-205ENST00000478928 NCAPD3P42695 1498 aa4.37□□□□□ -1.71
ACTR3-205ENST00000478928 BAZ1AQ9NRL2 1556 aaPredicted RBP4.36□□□□□ -1.71
ACTR3-205ENST00000478928 DCAF1Q9Y4B6 1507 aa4.36□□□□□ -1.71
ACTR3-205ENST00000478928 TOP2BQ02880 1626 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms