RNA–Protein interactions for RNA: ENST00000330022.11

SETD2-201, Transcript of SET domain containing 2, humanhuman

TSL 1 (best)

Gene SETD2, Length 8,172 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD2-201ENST00000330022 MYT1Q01538 1121 aa10.33□□□□□ -0.76
SETD2-201ENST00000330022 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
SETD2-201ENST00000330022 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
SETD2-201ENST00000330022 ERICH6Q7L0X2 663 aa9.78□□□□□ -0.84
SETD2-201ENST00000330022 RANGAP1P46060 587 aaPredicted RBP9.75□□□□□ -0.85
SETD2-201ENST00000330022 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
SETD2-201ENST00000330022 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
SETD2-201ENST00000330022 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
SETD2-201ENST00000330022 YTHDC1Q96MU7 727 aaKnown RBP9.1□□□□□ -0.95
SETD2-201ENST00000330022 MYT1LQ9UL68 1186 aa8.95□□□□□ -0.98
SETD2-201ENST00000330022 POLR3GLQ9BT43 218 aa8.9□□□□□ -0.98
SETD2-201ENST00000330022 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
SETD2-201ENST00000330022 CHIC1Q5VXU3 224 aa8.84□□□□□ -0.99
SETD2-201ENST00000330022 EIF5BO60841 1220 aaKnown RBP8.82□□□□□ -1
SETD2-201ENST00000330022 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
SETD2-201ENST00000330022 GLIPR1L2Q4G1C9 344 aa8.73□□□□□ -1.01
SETD2-201ENST00000330022 CCER1Q8TC90 406 aaPredicted RBP8.73□□□□□ -1.01
SETD2-201ENST00000330022 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
SETD2-201ENST00000330022 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
SETD2-201ENST00000330022 HOMEZQ8IX15 550 aa8.67□□□□□ -1.02
SETD2-201ENST00000330022 CENPBP07199 599 aaPredicted RBP8.62□□□□□ -1.03
SETD2-201ENST00000330022 PODXL2Q9NZ53 605 aa8.61□□□□□ -1.03
SETD2-201ENST00000330022 C14orf37Q86TY3 774 aa8.57□□□□□ -1.04
SETD2-201ENST00000330022 TULP1O00294 542 aaPredicted RBP8.55□□□□□ -1.04
SETD2-201ENST00000330022 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
SETD2-201ENST00000330022 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
SETD2-201ENST00000330022 NCBP3Q53F19 620 aaKnown RBP8.54□□□□□ -1.04
SETD2-201ENST00000330022 BCANQ96GW7 911 aa8.54□□□□□ -1.04
SETD2-201ENST00000330022 NEFLP07196 543 aa8.53□□□□□ -1.04
SETD2-201ENST00000330022 CDK11BP21127 795 aaKnown RBP8.49□□□□□ -1.05
SETD2-201ENST00000330022 CDK11AQ9UQ88 783 aaPredicted RBP8.49□□□□□ -1.05
SETD2-201ENST00000330022 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
SETD2-201ENST00000330022 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
SETD2-201ENST00000330022 ARXQ96QS3 562 aa8.46□□□□□ -1.06
SETD2-201ENST00000330022 PRKCSHP14314 528 aaPredicted RBP8.45□□□□□ -1.06
SETD2-201ENST00000330022 PLPPR3Q6T4P5 718 aa8.42□□□□□ -1.06
SETD2-201ENST00000330022 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
SETD2-201ENST00000330022 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
SETD2-201ENST00000330022 NBR1Q14596 966 aa8.32□□□□□ -1.08
SETD2-201ENST00000330022 CLSPNQ9HAW4 1339 aa8.32□□□□□ -1.08
SETD2-201ENST00000330022 SLC4A1APQ9BWU0 796 aaKnown RBP8.32□□□□□ -1.08
SETD2-201ENST00000330022 PTMSP20962 102 aa8.3□□□□□ -1.08
SETD2-201ENST00000330022 ARID3AQ99856 593 aa8.29□□□□□ -1.08
SETD2-201ENST00000330022 ZEB1P37275 1124 aaPredicted RBP8.29□□□□□ -1.08
SETD2-201ENST00000330022 ARID4BQ4LE39 1312 aaPredicted RBP8.28□□□□□ -1.08
SETD2-201ENST00000330022 ATP1B4Q9UN42 357 aaPredicted RBP8.27□□□□□ -1.09
SETD2-201ENST00000330022 SUPT5HO00267 1087 aaKnown RBP8.25□□□□□ -1.09
SETD2-201ENST00000330022 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.19□□□□□ -1.1
SETD2-201ENST00000330022 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.1
SETD2-201ENST00000330022 A0A0U1RQG5 324 aaPredicted RBP8.14□□□□□ -1.11
SETD2-201ENST00000330022 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
SETD2-201ENST00000330022 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
SETD2-201ENST00000330022 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
SETD2-201ENST00000330022 NCLP19338 710 aaKnown RBP8.12□□□□□ -1.11
SETD2-201ENST00000330022 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
SETD2-201ENST00000330022 LAS1LQ9Y4W2 734 aaKnown RBP8.07□□□□□ -1.12
SETD2-201ENST00000330022 APLP2Q06481 763 aa8.06□□□□□ -1.12
SETD2-201ENST00000330022 KCNA4P22459 653 aa8.06□□□□□ -1.12
SETD2-201ENST00000330022 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
SETD2-201ENST00000330022 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
SETD2-201ENST00000330022 ZNF526Q8TF50 670 aaPredicted RBP8.04□□□□□ -1.12
SETD2-201ENST00000330022 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
SETD2-201ENST00000330022 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
SETD2-201ENST00000330022 USP35Q9P2H5 1018 aa8.03□□□□□ -1.12
SETD2-201ENST00000330022 CALRP27797 417 aaKnown RBP8.02□□□□□ -1.13
SETD2-201ENST00000330022 PDE4CQ08493 712 aa8.01□□□□□ -1.13
SETD2-201ENST00000330022 HSP90B1P14625 803 aaKnown RBP8□□□□□ -1.13
SETD2-201ENST00000330022 NISCHQ9Y2I1 1504 aa7.99□□□□□ -1.13
SETD2-201ENST00000330022 NAP1L5Q96NT1 182 aaPredicted RBP7.98□□□□□ -1.13
SETD2-201ENST00000330022 FKBP8Q14318 412 aa7.97□□□□□ -1.13
SETD2-201ENST00000330022 PDIA4P13667 645 aaKnown RBP7.95□□□□□ -1.14
SETD2-201ENST00000330022 PKNOX2Q96KN3 472 aa7.95□□□□□ -1.14
SETD2-201ENST00000330022 TRIM44Q96DX7 344 aaPredicted RBP7.94□□□□□ -1.14
SETD2-201ENST00000330022 PPM1GO15355 546 aaPredicted RBP7.92□□□□□ -1.14
SETD2-201ENST00000330022 CNGB1Q14028 1251 aaPredicted RBP7.92□□□□□ -1.14
SETD2-201ENST00000330022 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
SETD2-201ENST00000330022 KLHL34Q8N239 644 aa7.91□□□□□ -1.14
SETD2-201ENST00000330022 CSRNP3Q8WYN3 585 aa7.9□□□□□ -1.14
SETD2-201ENST00000330022 APPP05067 770 aa7.89□□□□□ -1.15
SETD2-201ENST00000330022 BRD2P25440 801 aaKnown RBP7.85□□□□□ -1.15
SETD2-201ENST00000330022 PSMD1Q99460 953 aa7.85□□□□□ -1.15
SETD2-201ENST00000330022 ANP32EQ9BTT0 268 aa7.84□□□□□ -1.15
SETD2-201ENST00000330022 PLCB2Q00722 1185 aa7.84□□□□□ -1.15
SETD2-201ENST00000330022 HMGB1P1B2RPK0 211 aaPredicted RBP7.83□□□□□ -1.16
SETD2-201ENST00000330022 PAXIP1Q6ZW49 1069 aaPredicted RBP7.83□□□□□ -1.16
SETD2-201ENST00000330022 ANP32BQ92688 251 aaKnown RBP7.82□□□□□ -1.16
SETD2-201ENST00000330022 LMOD2Q6P5Q4 547 aa7.82□□□□□ -1.16
SETD2-201ENST00000330022 PTMAP06454 111 aaKnown RBP7.82□□□□□ -1.16
SETD2-201ENST00000330022 TAF7LQ5H9L4 462 aa7.82□□□□□ -1.16
SETD2-201ENST00000330022 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
SETD2-201ENST00000330022 AEBP1Q8IUX7 1158 aa7.77□□□□□ -1.16
SETD2-201ENST00000330022 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
SETD2-201ENST00000330022 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
SETD2-201ENST00000330022 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
SETD2-201ENST00000330022 STK11IPQ8N1F8 1099 aa7.74□□□□□ -1.17
SETD2-201ENST00000330022 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
SETD2-201ENST00000330022 NEFMP07197 916 aa7.72□□□□□ -1.17
SETD2-201ENST00000330022 RBM25P49756 843 aaKnown RBP7.72□□□□□ -1.17
SETD2-201ENST00000330022 NEFHP12036 1026 aa7.71□□□□□ -1.17
SETD2-201ENST00000330022 CLSTN1O94985 981 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms