RNA–Protein interactions for RNA: ENST00000423424.5

FNDC3B-205, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3 BASIC

Gene FNDC3B, Length 408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-205ENST00000423424 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
FNDC3B-205ENST00000423424 ABCC9O60706 1549 aa19.98■□□□□ 0.79
FNDC3B-205ENST00000423424 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
FNDC3B-205ENST00000423424 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
FNDC3B-205ENST00000423424 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
FNDC3B-205ENST00000423424 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
FNDC3B-205ENST00000423424 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
FNDC3B-205ENST00000423424 NACADO15069 1562 aa18.37■□□□□ 0.53
FNDC3B-205ENST00000423424 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
FNDC3B-205ENST00000423424 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
FNDC3B-205ENST00000423424 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
FNDC3B-205ENST00000423424 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
FNDC3B-205ENST00000423424 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
FNDC3B-205ENST00000423424 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
FNDC3B-205ENST00000423424 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
FNDC3B-205ENST00000423424 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
FNDC3B-205ENST00000423424 CUX2O14529 1486 aa17.52■□□□□ 0.4
FNDC3B-205ENST00000423424 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
FNDC3B-205ENST00000423424 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
FNDC3B-205ENST00000423424 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
FNDC3B-205ENST00000423424 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
FNDC3B-205ENST00000423424 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
FNDC3B-205ENST00000423424 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
FNDC3B-205ENST00000423424 NESP48681 1621 aa16.96■□□□□ 0.31
FNDC3B-205ENST00000423424 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
FNDC3B-205ENST00000423424 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
FNDC3B-205ENST00000423424 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
FNDC3B-205ENST00000423424 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
FNDC3B-205ENST00000423424 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
FNDC3B-205ENST00000423424 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
FNDC3B-205ENST00000423424 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
FNDC3B-205ENST00000423424 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
FNDC3B-205ENST00000423424 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
FNDC3B-205ENST00000423424 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
FNDC3B-205ENST00000423424 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
FNDC3B-205ENST00000423424 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
FNDC3B-205ENST00000423424 WDR62O43379 1518 aa16.53■□□□□ 0.24
FNDC3B-205ENST00000423424 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
FNDC3B-205ENST00000423424 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
FNDC3B-205ENST00000423424 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
FNDC3B-205ENST00000423424 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
FNDC3B-205ENST00000423424 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
FNDC3B-205ENST00000423424 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
FNDC3B-205ENST00000423424 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
FNDC3B-205ENST00000423424 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
FNDC3B-205ENST00000423424 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
FNDC3B-205ENST00000423424 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.2
FNDC3B-205ENST00000423424 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
FNDC3B-205ENST00000423424 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
FNDC3B-205ENST00000423424 URB2Q14146 1524 aaKnown RBP16.16■□□□□ 0.18
FNDC3B-205ENST00000423424 ARAP1Q96P48 1450 aa16.14■□□□□ 0.17
FNDC3B-205ENST00000423424 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
FNDC3B-205ENST00000423424 CFTRP13569 1480 aa16.09■□□□□ 0.17
FNDC3B-205ENST00000423424 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
FNDC3B-205ENST00000423424 WIZO95785 1651 aa16■□□□□ 0.15
FNDC3B-205ENST00000423424 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
FNDC3B-205ENST00000423424 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
FNDC3B-205ENST00000423424 CHD1O14646 1710 aa15.94■□□□□ 0.14
FNDC3B-205ENST00000423424 FBLN2P98095 1184 aa15.88■□□□□ 0.13
FNDC3B-205ENST00000423424 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
FNDC3B-205ENST00000423424 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■□□□□ 10.3
FNDC3B-205ENST00000423424 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
FNDC3B-205ENST00000423424 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
FNDC3B-205ENST00000423424 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
FNDC3B-205ENST00000423424 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
FNDC3B-205ENST00000423424 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
FNDC3B-205ENST00000423424 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
FNDC3B-205ENST00000423424 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
FNDC3B-205ENST00000423424 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
FNDC3B-205ENST00000423424 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
FNDC3B-205ENST00000423424 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
FNDC3B-205ENST00000423424 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
FNDC3B-205ENST00000423424 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
FNDC3B-205ENST00000423424 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
FNDC3B-205ENST00000423424 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
FNDC3B-205ENST00000423424 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
FNDC3B-205ENST00000423424 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
FNDC3B-205ENST00000423424 SOGA1O94964 1423 aa15.55■□□□□ 0.08
FNDC3B-205ENST00000423424 SYNJ2O15056 1496 aa15.54■□□□□ 0.08
FNDC3B-205ENST00000423424 KDM4FA0A1W2PPD8 638 aa15.54■□□□□ 0.08
FNDC3B-205ENST00000423424 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
FNDC3B-205ENST00000423424 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
FNDC3B-205ENST00000423424 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
FNDC3B-205ENST00000423424 KIF13AQ9H1H9 1805 aa15.48■□□□□ 0.07
FNDC3B-205ENST00000423424 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
FNDC3B-205ENST00000423424 CEP170Q5SW79 1584 aa15.37■□□□□ 0.05
FNDC3B-205ENST00000423424 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
FNDC3B-205ENST00000423424 FAM69CQ0P6D2 419 aa15.36■□□□□ 0.05
FNDC3B-205ENST00000423424 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
FNDC3B-205ENST00000423424 KDM6BO15054 1643 aa15.33■□□□□ 0.04
FNDC3B-205ENST00000423424 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
FNDC3B-205ENST00000423424 CUX1P39880 1505 aa15.31■□□□□ 0.04
FNDC3B-205ENST00000423424 SHROOM2Q13796 1616 aa15.29■□□□□ 0.04
FNDC3B-205ENST00000423424 NUP160Q12769 1436 aa15.29■□□□□ 0.04
FNDC3B-205ENST00000423424 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
FNDC3B-205ENST00000423424 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
FNDC3B-205ENST00000423424 HECW2Q9P2P5 1572 aa15.26■□□□□ 0.03
FNDC3B-205ENST00000423424 MAPKBP1O60336 1514 aa15.25■□□□□ 0.03
FNDC3B-205ENST00000423424 ADGRL1O94910 1474 aa15.22■□□□□ 0.03
FNDC3B-205ENST00000423424 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms