RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
MRPL42-205ENST00000549561 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
MRPL42-205ENST00000549561 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
MRPL42-205ENST00000549561 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
MRPL42-205ENST00000549561 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
MRPL42-205ENST00000549561 FOXD1Q16676 465 aa17.01■□□□□ 0.31
MRPL42-205ENST00000549561 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
MRPL42-205ENST00000549561 ADRA2BP18089 450 aa16.29■□□□□ 0.2
MRPL42-205ENST00000549561 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
MRPL42-205ENST00000549561 MSH5O43196 834 aa15.96■□□□□ 0.15
MRPL42-205ENST00000549561 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
MRPL42-205ENST00000549561 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
MRPL42-205ENST00000549561 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
MRPL42-205ENST00000549561 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
MRPL42-205ENST00000549561 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
MRPL42-205ENST00000549561 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
MRPL42-205ENST00000549561 KCNA4P22459 653 aa14.59□□□□□ -0.07
MRPL42-205ENST00000549561 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
MRPL42-205ENST00000549561 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
MRPL42-205ENST00000549561 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
MRPL42-205ENST00000549561 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
MRPL42-205ENST00000549561 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
MRPL42-205ENST00000549561 DCAF8L1A6NGE4 600 aa13.91□□□□□ -0.18
MRPL42-205ENST00000549561 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
MRPL42-205ENST00000549561 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
MRPL42-205ENST00000549561 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
MRPL42-205ENST00000549561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.248e-10■■■□□ 17.4
MRPL42-205ENST00000549561 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
MRPL42-205ENST00000549561 ZBTB22O15209 634 aa13.45□□□□□ -0.26
MRPL42-205ENST00000549561 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
MRPL42-205ENST00000549561 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
MRPL42-205ENST00000549561 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
MRPL42-205ENST00000549561 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
MRPL42-205ENST00000549561 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
MRPL42-205ENST00000549561 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
MRPL42-205ENST00000549561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
MRPL42-205ENST00000549561 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
MRPL42-205ENST00000549561 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
MRPL42-205ENST00000549561 APLP2Q06481 763 aa13.06□□□□□ -0.32
MRPL42-205ENST00000549561 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
MRPL42-205ENST00000549561 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
MRPL42-205ENST00000549561 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
MRPL42-205ENST00000549561 CAPN15O75808 1086 aa12.93□□□□□ -0.34
MRPL42-205ENST00000549561 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
MRPL42-205ENST00000549561 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
MRPL42-205ENST00000549561 DSG3P32926 999 aa12.8□□□□□ -0.36
MRPL42-205ENST00000549561 ABCB7O75027 752 aa12.69□□□□□ -0.38
MRPL42-205ENST00000549561 POLA2Q14181 598 aa12.66□□□□□ -0.38
MRPL42-205ENST00000549561 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
MRPL42-205ENST00000549561 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
MRPL42-205ENST00000549561 FBLN2P98095 1184 aa12.37□□□□□ -0.43
MRPL42-205ENST00000549561 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
MRPL42-205ENST00000549561 POTEHQ6S545 545 aa12.2□□□□□ -0.46
MRPL42-205ENST00000549561 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
MRPL42-205ENST00000549561 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
MRPL42-205ENST00000549561 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
MRPL42-205ENST00000549561 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
MRPL42-205ENST00000549561 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
MRPL42-205ENST00000549561 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
MRPL42-205ENST00000549561 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
MRPL42-205ENST00000549561 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
MRPL42-205ENST00000549561 FKBP8Q14318 412 aa11.99□□□□□ -0.49
MRPL42-205ENST00000549561 PROM2Q8N271 834 aa11.93□□□□□ -0.5
MRPL42-205ENST00000549561 REM2Q8IYK8 340 aaPredicted RBP11.9□□□□□ -0.5
MRPL42-205ENST00000549561 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
MRPL42-205ENST00000549561 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
MRPL42-205ENST00000549561 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
MRPL42-205ENST00000549561 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
MRPL42-205ENST00000549561 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
MRPL42-205ENST00000549561 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
MRPL42-205ENST00000549561 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
MRPL42-205ENST00000549561 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
MRPL42-205ENST00000549561 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
MRPL42-205ENST00000549561 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
MRPL42-205ENST00000549561 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
MRPL42-205ENST00000549561 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
MRPL42-205ENST00000549561 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
MRPL42-205ENST00000549561 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
MRPL42-205ENST00000549561 HAX1O00165 279 aa11.42□□□□□ -0.58
MRPL42-205ENST00000549561 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
MRPL42-205ENST00000549561 MIER1Q8N108 512 aa11.4□□□□□ -0.58
MRPL42-205ENST00000549561 MNX1P50219 401 aaPredicted RBP11.38□□□□□ -0.59
MRPL42-205ENST00000549561 PLCD3Q8N3E9 789 aa11.38□□□□□ -0.59
MRPL42-205ENST00000549561 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
MRPL42-205ENST00000549561 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
MRPL42-205ENST00000549561 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
MRPL42-205ENST00000549561 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
MRPL42-205ENST00000549561 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
MRPL42-205ENST00000549561 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
MRPL42-205ENST00000549561 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
MRPL42-205ENST00000549561 NUBP1P53384 320 aa11.18□□□□□ -0.62
MRPL42-205ENST00000549561 EVX2Q03828 476 aa11.18□□□□□ -0.62
MRPL42-205ENST00000549561 SPOCK2Q92563 424 aa11.16□□□□□ -0.62
MRPL42-205ENST00000549561 RASEFQ8IZ41 740 aa11.12□□□□□ -0.63
MRPL42-205ENST00000549561 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
MRPL42-205ENST00000549561 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
MRPL42-205ENST00000549561 PAK3O75914 559 aaPredicted RBP11.04□□□□□ -0.64
MRPL42-205ENST00000549561 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
MRPL42-205ENST00000549561 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
MRPL42-205ENST00000549561 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms