RNA–Protein interactions for RNA: ENST00000448323.5

SEC31A-208, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SEC31A, Length 4,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-208ENST00000448323 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.95
SEC31A-208ENST00000448323 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
SEC31A-208ENST00000448323 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
SEC31A-208ENST00000448323 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
SEC31A-208ENST00000448323 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
SEC31A-208ENST00000448323 HRCP23327 699 aa20.73■□□□□ 0.91
SEC31A-208ENST00000448323 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
SEC31A-208ENST00000448323 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
SEC31A-208ENST00000448323 DCAF8L2P0C7V8 631 aa20.19■□□□□ 0.82
SEC31A-208ENST00000448323 MYT1Q01538 1121 aa20.15■□□□□ 0.82
SEC31A-208ENST00000448323 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
SEC31A-208ENST00000448323 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
SEC31A-208ENST00000448323 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
SEC31A-208ENST00000448323 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
SEC31A-208ENST00000448323 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
SEC31A-208ENST00000448323 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
SEC31A-208ENST00000448323 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
SEC31A-208ENST00000448323 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
SEC31A-208ENST00000448323 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
SEC31A-208ENST00000448323 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
SEC31A-208ENST00000448323 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
SEC31A-208ENST00000448323 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
SEC31A-208ENST00000448323 NEUROD1Q13562 356 aa19.39■□□□□ 0.69
SEC31A-208ENST00000448323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
SEC31A-208ENST00000448323 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
SEC31A-208ENST00000448323 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
SEC31A-208ENST00000448323 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
SEC31A-208ENST00000448323 ERICH6Q7L0X2 663 aa19.01■□□□□ 0.63
SEC31A-208ENST00000448323 BCANQ96GW7 911 aa18.86■□□□□ 0.61
SEC31A-208ENST00000448323 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
SEC31A-208ENST00000448323 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
SEC31A-208ENST00000448323 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
SEC31A-208ENST00000448323 NEFLP07196 543 aa18.64■□□□□ 0.57
SEC31A-208ENST00000448323 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
SEC31A-208ENST00000448323 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
SEC31A-208ENST00000448323 ANP32EQ9BTT0 268 aa18.56■□□□□ 0.56
SEC31A-208ENST00000448323 MIER1Q8N108 512 aa18.54■□□□□ 0.56
SEC31A-208ENST00000448323 APLP2Q06481 763 aa18.49■□□□□ 0.55
SEC31A-208ENST00000448323 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
SEC31A-208ENST00000448323 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
SEC31A-208ENST00000448323 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.52
SEC31A-208ENST00000448323 FKBP8Q14318 412 aa18.29■□□□□ 0.52
SEC31A-208ENST00000448323 ITGAEP38570 1179 aa18.26■□□□□ 0.51
SEC31A-208ENST00000448323 SUPT16HQ9Y5B9 1047 aaKnown RBP18.24■□□□□ 0.51
SEC31A-208ENST00000448323 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
SEC31A-208ENST00000448323 NBR1Q14596 966 aa18.11■□□□□ 0.49
SEC31A-208ENST00000448323 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
SEC31A-208ENST00000448323 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
SEC31A-208ENST00000448323 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
SEC31A-208ENST00000448323 PRKCSHP14314 528 aaPredicted RBP18.05■□□□□ 0.48
SEC31A-208ENST00000448323 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
SEC31A-208ENST00000448323 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
SEC31A-208ENST00000448323 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
SEC31A-208ENST00000448323 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
SEC31A-208ENST00000448323 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
SEC31A-208ENST00000448323 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
SEC31A-208ENST00000448323 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
SEC31A-208ENST00000448323 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
SEC31A-208ENST00000448323 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
SEC31A-208ENST00000448323 ATP1B4Q9UN42 357 aaPredicted RBP17.81■□□□□ 0.44
SEC31A-208ENST00000448323 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
SEC31A-208ENST00000448323 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
SEC31A-208ENST00000448323 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
SEC31A-208ENST00000448323 ANP32CO43423 234 aa17.73■□□□□ 0.43
SEC31A-208ENST00000448323 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
SEC31A-208ENST00000448323 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
SEC31A-208ENST00000448323 POLR3GLQ9BT43 218 aa17.68■□□□□ 0.42
SEC31A-208ENST00000448323 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
SEC31A-208ENST00000448323 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
SEC31A-208ENST00000448323 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
SEC31A-208ENST00000448323 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
SEC31A-208ENST00000448323 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
SEC31A-208ENST00000448323 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
SEC31A-208ENST00000448323 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
SEC31A-208ENST00000448323 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
SEC31A-208ENST00000448323 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
SEC31A-208ENST00000448323 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
SEC31A-208ENST00000448323 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
SEC31A-208ENST00000448323 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
SEC31A-208ENST00000448323 FAM50AQ14320 339 aaKnown RBP17.44■□□□□ 0.38
SEC31A-208ENST00000448323 ARXQ96QS3 562 aa17.41■□□□□ 0.38
SEC31A-208ENST00000448323 MSH5O43196 834 aa17.4■□□□□ 0.38
SEC31A-208ENST00000448323 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
SEC31A-208ENST00000448323 NEFMP07197 916 aa17.33■□□□□ 0.36
SEC31A-208ENST00000448323 IL27Q8NEV9 243 aa17.32■□□□□ 0.36
SEC31A-208ENST00000448323 GLIPR1L2Q4G1C9 344 aa17.24■□□□□ 0.35
SEC31A-208ENST00000448323 PPP4R2Q9NY27 417 aa17.23■□□□□ 0.35
SEC31A-208ENST00000448323 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
SEC31A-208ENST00000448323 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
SEC31A-208ENST00000448323 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
SEC31A-208ENST00000448323 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
SEC31A-208ENST00000448323 PAK3O75914 559 aaPredicted RBP17.15■□□□□ 0.34
SEC31A-208ENST00000448323 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
SEC31A-208ENST00000448323 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
SEC31A-208ENST00000448323 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
SEC31A-208ENST00000448323 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
SEC31A-208ENST00000448323 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
SEC31A-208ENST00000448323 CLIP1P30622 1438 aa17.05■□□□□ 0.32
SEC31A-208ENST00000448323 NAP1L5Q96NT1 182 aaPredicted RBP17.04■□□□□ 0.32
SEC31A-208ENST00000448323 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms