RNA–Protein interactions for RNA: ENST00000581486.5

NCOA4-204, Transcript of nuclear receptor coactivator 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCOA4, Length 3,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-204ENST00000581486 NISCHQ9Y2I1 1504 aa15.06■□□□□ 0
NCOA4-204ENST00000581486 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
NCOA4-204ENST00000581486 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
NCOA4-204ENST00000581486 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
NCOA4-204ENST00000581486 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
NCOA4-204ENST00000581486 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
NCOA4-204ENST00000581486 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
NCOA4-204ENST00000581486 PCGF6Q9BYE7 350 aa12.84□□□□□ -0.35
NCOA4-204ENST00000581486 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
NCOA4-204ENST00000581486 TTBK1Q5TCY1 1321 aaPredicted RBP12.76□□□□□ -0.37
NCOA4-204ENST00000581486 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
NCOA4-204ENST00000581486 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
NCOA4-204ENST00000581486 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
NCOA4-204ENST00000581486 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
NCOA4-204ENST00000581486 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
NCOA4-204ENST00000581486 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
NCOA4-204ENST00000581486 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
NCOA4-204ENST00000581486 ABCC9O60706 1549 aa12.31□□□□□ -0.44
NCOA4-204ENST00000581486 HRCP23327 699 aa12.27□□□□□ -0.45
NCOA4-204ENST00000581486 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
NCOA4-204ENST00000581486 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
NCOA4-204ENST00000581486 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
NCOA4-204ENST00000581486 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
NCOA4-204ENST00000581486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
NCOA4-204ENST00000581486 NACADO15069 1562 aa11.98□□□□□ -0.49
NCOA4-204ENST00000581486 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
NCOA4-204ENST00000581486 SCRIBQ14160 1630 aa11.96□□□□□ -0.49
NCOA4-204ENST00000581486 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
NCOA4-204ENST00000581486 APLP2Q06481 763 aa11.95□□□□□ -0.5
NCOA4-204ENST00000581486 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
NCOA4-204ENST00000581486 ITGAEP38570 1179 aa11.91□□□□□ -0.5
NCOA4-204ENST00000581486 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
NCOA4-204ENST00000581486 RB1CC1Q8TDY2 1594 aa11.76□□□□□ -0.53
NCOA4-204ENST00000581486 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
NCOA4-204ENST00000581486 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
NCOA4-204ENST00000581486 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
NCOA4-204ENST00000581486 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
NCOA4-204ENST00000581486 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
NCOA4-204ENST00000581486 BAZ1AQ9NRL2 1556 aaPredicted RBP11.63□□□□□ -0.55
NCOA4-204ENST00000581486 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
NCOA4-204ENST00000581486 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
NCOA4-204ENST00000581486 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
NCOA4-204ENST00000581486 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
NCOA4-204ENST00000581486 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
NCOA4-204ENST00000581486 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
NCOA4-204ENST00000581486 WIZO95785 1651 aa11.57□□□□□ -0.56
NCOA4-204ENST00000581486 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
NCOA4-204ENST00000581486 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
NCOA4-204ENST00000581486 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
NCOA4-204ENST00000581486 NEUROD1Q13562 356 aa11.49□□□□□ -0.57
NCOA4-204ENST00000581486 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
NCOA4-204ENST00000581486 FAM50AQ14320 339 aaKnown RBP11.48□□□□□ -0.57
NCOA4-204ENST00000581486 SOGA1O94964 1423 aa11.47□□□□□ -0.57
NCOA4-204ENST00000581486 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
NCOA4-204ENST00000581486 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
NCOA4-204ENST00000581486 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
NCOA4-204ENST00000581486 RUSC2Q8N2Y8 1516 aa11.42□□□□□ -0.58
NCOA4-204ENST00000581486 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
NCOA4-204ENST00000581486 HIRIP3Q9BW71 556 aaPredicted RBP11.41□□□□□ -0.58
NCOA4-204ENST00000581486 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
NCOA4-204ENST00000581486 POLR3GLQ9BT43 218 aa11.37□□□□□ -0.59
NCOA4-204ENST00000581486 CEP162Q5TB80 1403 aa11.35□□□□□ -0.59
NCOA4-204ENST00000581486 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
NCOA4-204ENST00000581486 BCANQ96GW7 911 aa11.33□□□□□ -0.6
NCOA4-204ENST00000581486 MIER1Q8N108 512 aa11.31□□□□□ -0.6
NCOA4-204ENST00000581486 FBLN2P98095 1184 aa11.3□□□□□ -0.6
NCOA4-204ENST00000581486 ACIN1Q9UKV3 1341 aaKnown RBP11.28□□□□□ -0.6
NCOA4-204ENST00000581486 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.615e-6■■□□□ 12.5
NCOA4-204ENST00000581486 CLIP1P30622 1438 aa11.25□□□□□ -0.61
NCOA4-204ENST00000581486 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
NCOA4-204ENST00000581486 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
NCOA4-204ENST00000581486 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
NCOA4-204ENST00000581486 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
NCOA4-204ENST00000581486 ZNF326Q5BKZ1 582 aaKnown RBP11.21□□□□□ -0.62
NCOA4-204ENST00000581486 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
NCOA4-204ENST00000581486 SIN3AQ96ST3 1273 aa11.16□□□□□ -0.62
NCOA4-204ENST00000581486 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
NCOA4-204ENST00000581486 BAZ1BQ9UIG0 1483 aaKnown RBP11.15□□□□□ -0.62
NCOA4-204ENST00000581486 EEA1Q15075 1411 aa11.15□□□□□ -0.63
NCOA4-204ENST00000581486 TNIKQ9UKE5 1360 aa11.14□□□□□ -0.63
NCOA4-204ENST00000581486 ZNF777Q9ULD5 760 aaPredicted RBP11.13□□□□□ -0.63
NCOA4-204ENST00000581486 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
NCOA4-204ENST00000581486 KCNH8Q96L42 1107 aa11.11□□□□□ -0.63
NCOA4-204ENST00000581486 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
NCOA4-204ENST00000581486 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
NCOA4-204ENST00000581486 RRP7BPQ9NSQ0 103 aa11.09□□□□□ -0.63
NCOA4-204ENST00000581486 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
NCOA4-204ENST00000581486 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
NCOA4-204ENST00000581486 KIF21BO75037 1637 aa11.07□□□□□ -0.64
NCOA4-204ENST00000581486 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
NCOA4-204ENST00000581486 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
NCOA4-204ENST00000581486 NEFLP07196 543 aa11.05□□□□□ -0.64
NCOA4-204ENST00000581486 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
NCOA4-204ENST00000581486 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
NCOA4-204ENST00000581486 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
NCOA4-204ENST00000581486 TOP2BQ02880 1626 aa11.03□□□□□ -0.64
NCOA4-204ENST00000581486 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
NCOA4-204ENST00000581486 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
NCOA4-204ENST00000581486 FOXD1Q16676 465 aa11□□□□□ -0.65
NCOA4-204ENST00000581486 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms