Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 SLC47A1P1-202ENST00000449666 945 ntBASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 MIR638-201ENST00000385237 100 ntBASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC091305.1-201ENST00000479476 895 ntBASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 AP001330.3-201ENST00000520123 633 ntBASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 AP005435.1-201ENST00000529293 1178 ntBASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC087239.1-201ENST00000622671 572 ntBASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV23-1A0A0A0MS06 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV23-1A0A0A0MS06 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 MIR939-201ENST00000401314 82 ntBASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 AL031602.1-201ENST00000633169 911 ntBASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV23-1A0A0A0MS06 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 AF213884.3-201ENST00000563833 479 ntBASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC142381.2-201ENST00000566120 298 ntBASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 AL031432.3-201ENST00000607698 485 ntBASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC005837.3-201ENST00000612163 286 ntBASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 RASA4CP-201ENST00000424092 1398 ntBASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV23-1A0A0A0MS06 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 LINC01960-201ENST00000563759 1884 ntBASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC010525.1-201ENST00000585559 441 ntBASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC008764.7-201ENST00000593779 1081 ntBASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC019069.1-201ENST00000610008 1333 ntBASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TRBV23-1A0A0A0MS06 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 SUDS3P1-201ENST00000505831 966 ntBASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 AC126544.1-201ENST00000580842 1059 ntBASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV23-1A0A0A0MS06 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV23-1A0A0A0MS06 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms