RNA–Protein interactions for RNA: ENST00000520123.1

AP001330.3-201, humanhuman

BASIC

Gene AP001330.3, Length 633 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001330.3-201ENST00000520123 NISCHQ9Y2I1 1504 aa55.03■■■■■ 6.4
AP001330.3-201ENST00000520123 CCDC180Q9P1Z9 1646 aa49.24■■■■■ 5.47
AP001330.3-201ENST00000520123 ABCC9O60706 1549 aa48.64■■■■■ 5.38
AP001330.3-201ENST00000520123 RB1CC1Q8TDY2 1594 aa46.56■■■■■ 5.04
AP001330.3-201ENST00000520123 NACADO15069 1562 aa46.37■■■■■ 5.01
AP001330.3-201ENST00000520123 DCAF8L2P0C7V8 631 aa46.02■■■■■ 4.96
AP001330.3-201ENST00000520123 MYO15BQ96JP2 1530 aa45.93■■■■■ 4.94
AP001330.3-201ENST00000520123 ZCCHC6Q5VYS8 1495 aaKnown RBP45.77■■■■■ 4.92
AP001330.3-201ENST00000520123 UNC13AQ9UPW8 1703 aa45.59■■■■■ 4.89
AP001330.3-201ENST00000520123 DCAF1Q9Y4B6 1507 aa45.52■■■■■ 4.88
AP001330.3-201ENST00000520123 PABPN1Q86U42 306 aaKnown RBP eCLIP45.29■■■■■ 4.84
AP001330.3-201ENST00000520123 BICRAQ9NZM4 1560 aa45.23■■■■■ 4.83
AP001330.3-201ENST00000520123 DNAJC5BQ9UF47 199 aa45.12■■■■■ 4.81
AP001330.3-201ENST00000520123 SCRIBQ14160 1630 aa44.86■■■■■ 4.77
AP001330.3-201ENST00000520123 SHROOM4Q9ULL8 1493 aa44.69■■■■■ 4.74
AP001330.3-201ENST00000520123 EIF4G1Q04637 1599 aaKnown RBP44.06■■■■■ 4.64
AP001330.3-201ENST00000520123 CC2D2AQ9P2K1 1620 aa44.02■■■■■ 4.64
AP001330.3-201ENST00000520123 CECR2Q9BXF3 1484 aa43.77■■■■■ 4.6
AP001330.3-201ENST00000520123 SMARCA4P51532 1647 aa42.86■■■■■ 4.45
AP001330.3-201ENST00000520123 NCAPD3P42695 1498 aa42.77■■■■■ 4.44
AP001330.3-201ENST00000520123 ATAD2BQ9ULI0 1458 aa42.73■■■■■ 4.43
AP001330.3-201ENST00000520123 BAZ1AQ9NRL2 1556 aaPredicted RBP42.69■■■■■ 4.43
AP001330.3-201ENST00000520123 SMARCA2P51531 1590 aa42.65■■■■■ 4.42
AP001330.3-201ENST00000520123 HMGXB3Q12766 1538 aa42.57■■■■■ 4.41
AP001330.3-201ENST00000520123 PEG3Q9GZU2 1588 aa42.45■■■■■ 4.39
AP001330.3-201ENST00000520123 MROH2BQ7Z745 1585 aa42.41■■■■■ 4.38
AP001330.3-201ENST00000520123 BAZ1BQ9UIG0 1483 aaKnown RBP42.34■■■■■ 4.37
AP001330.3-201ENST00000520123 NESP48681 1621 aa41.95■■■■■ 4.31
AP001330.3-201ENST00000520123 ERCC6Q03468 1493 aa41.95■■■■■ 4.31
AP001330.3-201ENST00000520123 WIZO95785 1651 aa41.93■■■■■ 4.3
AP001330.3-201ENST00000520123 LAMC3Q9Y6N6 1575 aa41.77■■■■■ 4.28
AP001330.3-201ENST00000520123 CUX2O14529 1486 aa41.75■■■■■ 4.27
AP001330.3-201ENST00000520123 RSF1Q96T23 1441 aaPredicted RBP41.69■■■■■ 4.26
AP001330.3-201ENST00000520123 THOC2Q8NI27 1593 aaKnown RBP41.51■■■■■ 4.24
AP001330.3-201ENST00000520123 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
AP001330.3-201ENST00000520123 CADPSQ9ULU8 1353 aa41.47■■■■■ 4.23
AP001330.3-201ENST00000520123 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
AP001330.3-201ENST00000520123 PDS5BQ9NTI5 1447 aa41.44■■■■■ 4.23
AP001330.3-201ENST00000520123 CFTRP13569 1480 aa41.15■■■■■ 4.18
AP001330.3-201ENST00000520123 MRC2Q9UBG0 1479 aa41.11■■■■■ 4.17
AP001330.3-201ENST00000520123 CEP164Q9UPV0 1460 aa41.05■■■■■ 4.16
AP001330.3-201ENST00000520123 DNAJC5Q9H3Z4 198 aa41.05■■■■■ 4.16
AP001330.3-201ENST00000520123 WDR62O43379 1518 aa41.03■■■■■ 4.16
AP001330.3-201ENST00000520123 FANCD2Q9BXW9 1451 aa41.03■■■■■ 4.16
AP001330.3-201ENST00000520123 CCDC88BA6NC98 1476 aa40.92■■■■■ 4.14
AP001330.3-201ENST00000520123 PRDM2Q13029 1718 aa40.87■■■■■ 4.13
AP001330.3-201ENST00000520123 URB2Q14146 1524 aaKnown RBP40.69■■■■■ 4.1
AP001330.3-201ENST00000520123 TOPBP1Q92547 1522 aa40.33■■■■■ 4.05
AP001330.3-201ENST00000520123 DNMBPQ6XZF7 1577 aa40.25■■■■■ 4.03
AP001330.3-201ENST00000520123 ABCC8Q09428 1581 aa40.24■■■■■ 4.03
AP001330.3-201ENST00000520123 IFT140Q96RY7 1462 aa40.19■■■■■ 4.03
AP001330.3-201ENST00000520123 SUPT5HO00267 1087 aaKnown RBP40.09■■■■■ 4.01
AP001330.3-201ENST00000520123 ZNF608Q9ULD9 1512 aaPredicted RBP40.09■■■■■ 4.01
AP001330.3-201ENST00000520123 TARBP1Q13395 1621 aaKnown RBP39.97■■■■□ 3.99
AP001330.3-201ENST00000520123 POLA1P09884 1462 aaPredicted RBP39.95■■■■□ 3.99
AP001330.3-201ENST00000520123 EIF4G3O43432 1585 aaKnown RBP39.95■■■■□ 3.99
AP001330.3-201ENST00000520123 CUX1P39880 1505 aa39.84■■■■□ 3.97
AP001330.3-201ENST00000520123 OSCARQ8IYS5 282 aa39.8■■■■□ 3.96
AP001330.3-201ENST00000520123 FGD5Q6ZNL6 1462 aa39.77■■■■□ 3.96
AP001330.3-201ENST00000520123 RAD54L2Q9Y4B4 1467 aa39.76■■■■□ 3.96
AP001330.3-201ENST00000520123 AQRO60306 1485 aaKnown RBP eCLIP39.75■■■■□ 3.95
AP001330.3-201ENST00000520123 SOGA1O94964 1423 aa39.7■■■■□ 3.95
AP001330.3-201ENST00000520123 WDR97A6NE52 1622 aa39.62■■■■□ 3.93
AP001330.3-201ENST00000520123 CHD1O14646 1710 aa39.56■■■■□ 3.92
AP001330.3-201ENST00000520123 TDRD9Q8NDG6 1382 aaKnown RBP39.56■■■■□ 3.92
AP001330.3-201ENST00000520123 TRIM41Q8WV44 630 aa39.43■■■■□ 3.9
AP001330.3-201ENST00000520123 SNAPC4Q5SXM2 1469 aa39.42■■■■□ 3.9
AP001330.3-201ENST00000520123 RIMBP3CA6NJZ7 1639 aa39.38■■■■□ 3.89
AP001330.3-201ENST00000520123 RIMBP3BA6NNM3 1639 aa39.38■■■■□ 3.89
AP001330.3-201ENST00000520123 RIMBP3Q9UFD9 1639 aa39.38■■■■□ 3.89
AP001330.3-201ENST00000520123 BIVM-ERCC5R4GMW8 1640 aa39.36■■■■□ 3.89
AP001330.3-201ENST00000520123 GRIN2BQ13224 1484 aa39.36■■■■□ 3.89
AP001330.3-201ENST00000520123 ABCA10Q8WWZ4 1543 aa39.35■■■■□ 3.89
AP001330.3-201ENST00000520123 TOP2BQ02880 1626 aa39.33■■■■□ 3.89
AP001330.3-201ENST00000520123 MAGI1Q96QZ7 1491 aaPredicted RBP39.33■■■■□ 3.89
AP001330.3-201ENST00000520123 SYNJ1O43426 1573 aa39.32■■■■□ 3.88
AP001330.3-201ENST00000520123 WRNQ14191 1432 aaPredicted RBP eCLIP39.31■■■■□ 3.88
AP001330.3-201ENST00000520123 ABCA5Q8WWZ7 1642 aa39.31■■■■□ 3.88
AP001330.3-201ENST00000520123 PBRM1Q86U86 1689 aa39.31■■■■□ 3.88
AP001330.3-201ENST00000520123 ARHGEF11O15085 1522 aa39.3■■■■□ 3.88
AP001330.3-201ENST00000520123 FBLN2P98095 1184 aa39.29■■■■□ 3.88
AP001330.3-201ENST00000520123 GAPVD1Q14C86 1478 aa39.28■■■■□ 3.88
AP001330.3-201ENST00000520123 SYNJ2O15056 1496 aa39.17■■■■□ 3.86
AP001330.3-201ENST00000520123 CLASP1Q7Z460 1538 aa39.12■■■■□ 3.85
AP001330.3-201ENST00000520123 CHMP7Q8WUX9 453 aaPredicted RBP39.1■■■■□ 3.85
AP001330.3-201ENST00000520123 ADAMTS12P58397 1594 aa38.98■■■■□ 3.83
AP001330.3-201ENST00000520123 ARAP1Q96P48 1450 aa38.96■■■■□ 3.83
AP001330.3-201ENST00000520123 ERICH3Q5RHP9 1530 aa38.88■■■■□ 3.81
AP001330.3-201ENST00000520123 GRIN2AQ12879 1464 aa38.87■■■■□ 3.81
AP001330.3-201ENST00000520123 CYB5RLQ6IPT4 315 aa38.83■■■■□ 3.81
AP001330.3-201ENST00000520123 FHAD1B1AJZ9 1412 aa38.8■■■■□ 3.8
AP001330.3-201ENST00000520123 CEP170Q5SW79 1584 aa38.74■■■■□ 3.79
AP001330.3-201ENST00000520123 NUP160Q12769 1436 aa38.73■■■■□ 3.79
AP001330.3-201ENST00000520123 SHROOM2Q13796 1616 aa38.54■■■■□ 3.76
AP001330.3-201ENST00000520123 KIF27Q86VH2 1401 aa38.52■■■■□ 3.76
AP001330.3-201ENST00000520123 ERCC6L2Q5T890 1561 aa38.52■■■■□ 3.76
AP001330.3-201ENST00000520123 CUL7Q14999 1698 aa38.44■■■■□ 3.74
AP001330.3-201ENST00000520123 RUSC2Q8N2Y8 1516 aa38.43■■■■□ 3.74
AP001330.3-201ENST00000520123 IGF1RP08069 1367 aa38.42■■■■□ 3.74
AP001330.3-201ENST00000520123 PRG4Q92954 1404 aaPredicted RBP38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms