RNA–Protein interactions for RNA: ENST00000342782.3

DUSP9-201, Transcript of dual specificity phosphatase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP9, Length 2,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9-201ENST00000342782 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
DUSP9-201ENST00000342782 CCDC180Q9P1Z9 1646 aa41.96■■■■■ 4.31
DUSP9-201ENST00000342782 ABCC9O60706 1549 aa40.32■■■■■ 4.05
DUSP9-201ENST00000342782 ZCCHC6Q5VYS8 1495 aaKnown RBP40.18■■■■■ 4.02
DUSP9-201ENST00000342782 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
DUSP9-201ENST00000342782 DCAF1Q9Y4B6 1507 aa39.51■■■■□ 3.92
DUSP9-201ENST00000342782 MYO15BQ96JP2 1530 aa39.19■■■■□ 3.86
DUSP9-201ENST00000342782 NACADO15069 1562 aa39.18■■■■□ 3.86
DUSP9-201ENST00000342782 RB1CC1Q8TDY2 1594 aa39■■■■□ 3.83
DUSP9-201ENST00000342782 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
DUSP9-201ENST00000342782 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
DUSP9-201ENST00000342782 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
DUSP9-201ENST00000342782 PABPN1Q86U42 306 aaKnown RBP eCLIP37.97■■■■□ 3.672e-9■□□□□ 10.5
DUSP9-201ENST00000342782 BICRAQ9NZM4 1560 aa37.96■■■■□ 3.67
DUSP9-201ENST00000342782 CECR2Q9BXF3 1484 aa37.43■■■■□ 3.58
DUSP9-201ENST00000342782 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
DUSP9-201ENST00000342782 MROH2BQ7Z745 1585 aa37.11■■■■□ 3.53
DUSP9-201ENST00000342782 RSF1Q96T23 1441 aaPredicted RBP37.05■■■■□ 3.52
DUSP9-201ENST00000342782 BAZ1AQ9NRL2 1556 aaPredicted RBP37.02■■■■□ 3.52
DUSP9-201ENST00000342782 SMARCA4P51532 1647 aa36.99■■■■□ 3.51
DUSP9-201ENST00000342782 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
DUSP9-201ENST00000342782 WIZO95785 1651 aa36.82■■■■□ 3.48
DUSP9-201ENST00000342782 ATAD2BQ9ULI0 1458 aa36.49■■■■□ 3.43
DUSP9-201ENST00000342782 PEG3Q9GZU2 1588 aa36.48■■■■□ 3.43
DUSP9-201ENST00000342782 CC2D2AQ9P2K1 1620 aa36.43■■■■□ 3.42
DUSP9-201ENST00000342782 SMARCA2P51531 1590 aa36.38■■■■□ 3.41
DUSP9-201ENST00000342782 TOP2AP11388 1531 aaKnown RBP36.29■■■■□ 3.4
DUSP9-201ENST00000342782 BAZ1BQ9UIG0 1483 aaKnown RBP36.25■■■■□ 3.39
DUSP9-201ENST00000342782 NCAPD3P42695 1498 aa36.2■■■■□ 3.39
DUSP9-201ENST00000342782 DNAJC5BQ9UF47 199 aa36.1■■■■□ 3.37
DUSP9-201ENST00000342782 HMGXB3Q12766 1538 aa36.1■■■■□ 3.37
DUSP9-201ENST00000342782 CCDC88BA6NC98 1476 aa35.98■■■■□ 3.35
DUSP9-201ENST00000342782 CFTRP13569 1480 aa35.29■■■■□ 3.24
DUSP9-201ENST00000342782 CHIC1Q5VXU3 224 aa35.28■■■■□ 3.24
DUSP9-201ENST00000342782 NESP48681 1621 aa35.28■■■■□ 3.24
DUSP9-201ENST00000342782 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
DUSP9-201ENST00000342782 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
DUSP9-201ENST00000342782 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
DUSP9-201ENST00000342782 LAMC3Q9Y6N6 1575 aa35.05■■■■□ 3.2
DUSP9-201ENST00000342782 FANCD2Q9BXW9 1451 aa34.91■■■■□ 3.18
DUSP9-201ENST00000342782 TRIM41Q8WV44 630 aa34.91■■■■□ 3.18
DUSP9-201ENST00000342782 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
DUSP9-201ENST00000342782 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
DUSP9-201ENST00000342782 SYNJ1O43426 1573 aa34.82■■■■□ 3.16
DUSP9-201ENST00000342782 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
DUSP9-201ENST00000342782 CEP164Q9UPV0 1460 aa34.72■■■■□ 3.15
DUSP9-201ENST00000342782 CUX1P39880 1505 aa34.71■■■■□ 3.15
DUSP9-201ENST00000342782 TOP2BQ02880 1626 aa34.62■■■■□ 3.13
DUSP9-201ENST00000342782 HRCP23327 699 aa34.61■■■■□ 3.13
DUSP9-201ENST00000342782 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
DUSP9-201ENST00000342782 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
DUSP9-201ENST00000342782 ERCC6Q03468 1493 aa34.53■■■■□ 3.12
DUSP9-201ENST00000342782 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
DUSP9-201ENST00000342782 DNMBPQ6XZF7 1577 aa34.47■■■■□ 3.11
DUSP9-201ENST00000342782 FAM9AQ8IZU1 332 aaPredicted RBP34.42■■■■□ 3.1
DUSP9-201ENST00000342782 FGD5Q6ZNL6 1462 aa34.4■■■■□ 3.1
DUSP9-201ENST00000342782 MRC2Q9UBG0 1479 aa34.4■■■■□ 3.1
DUSP9-201ENST00000342782 SOGA1O94964 1423 aa34.36■■■■□ 3.09
DUSP9-201ENST00000342782 RUSC2Q8N2Y8 1516 aa34.32■■■■□ 3.09
DUSP9-201ENST00000342782 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.08
DUSP9-201ENST00000342782 POLA1P09884 1462 aaPredicted RBP34.3■■■■□ 3.08
DUSP9-201ENST00000342782 RAD54L2Q9Y4B4 1467 aa34.25■■■■□ 3.07
DUSP9-201ENST00000342782 WDR62O43379 1518 aa34.25■■■■□ 3.07
DUSP9-201ENST00000342782 PCGF6Q9BYE7 350 aa34.12■■■■□ 3.05
DUSP9-201ENST00000342782 CUX2O14529 1486 aa34.1■■■■□ 3.05
DUSP9-201ENST00000342782 EHMT2Q96KQ7 1210 aa34.07■■■■□ 3.04
DUSP9-201ENST00000342782 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
DUSP9-201ENST00000342782 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
DUSP9-201ENST00000342782 ABCA10Q8WWZ4 1543 aa34.01■■■■□ 3.04
DUSP9-201ENST00000342782 WDR97A6NE52 1622 aa34■■■■□ 3.03
DUSP9-201ENST00000342782 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
DUSP9-201ENST00000342782 TDRD9Q8NDG6 1382 aaKnown RBP33.95■■■■□ 3.03
DUSP9-201ENST00000342782 CSRNP3Q8WYN3 585 aa33.95■■■■□ 3.03
DUSP9-201ENST00000342782 EEA1Q15075 1411 aa33.94■■■■□ 3.02
DUSP9-201ENST00000342782 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
DUSP9-201ENST00000342782 IFT140Q96RY7 1462 aa33.87■■■■□ 3.01
DUSP9-201ENST00000342782 AQRO60306 1485 aaKnown RBP eCLIP33.82■■■■□ 32e-7■■■■■ 36.1
DUSP9-201ENST00000342782 ABCA5Q8WWZ7 1642 aa33.82■■■■□ 3
DUSP9-201ENST00000342782 IGF1RP08069 1367 aa33.78■■■■□ 3
DUSP9-201ENST00000342782 GAPVD1Q14C86 1478 aa33.76■■■■□ 3
DUSP9-201ENST00000342782 PPARGC1BQ86YN6 1023 aaKnown RBP33.71■■■□□ 2.99
DUSP9-201ENST00000342782 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.98
DUSP9-201ENST00000342782 RAPGEF2Q9Y4G8 1499 aa33.66■■■□□ 2.98
DUSP9-201ENST00000342782 PRXQ9BXM0 1461 aa33.65■■■□□ 2.98
DUSP9-201ENST00000342782 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
DUSP9-201ENST00000342782 KIF21BO75037 1637 aa33.64■■■□□ 2.98
DUSP9-201ENST00000342782 CARMIL1Q5VZK9 1371 aa33.58■■■□□ 2.97
DUSP9-201ENST00000342782 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
DUSP9-201ENST00000342782 GOLGA3Q08378 1498 aa33.56■■■□□ 2.96
DUSP9-201ENST00000342782 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
DUSP9-201ENST00000342782 UBTFP17480 764 aaKnown RBP33.52■■■□□ 2.96
DUSP9-201ENST00000342782 CUL7Q14999 1698 aa33.49■■■□□ 2.95
DUSP9-201ENST00000342782 SNAPC4Q5SXM2 1469 aa33.45■■■□□ 2.95
DUSP9-201ENST00000342782 ADAMTS12P58397 1594 aa33.41■■■□□ 2.94
DUSP9-201ENST00000342782 TRIM26Q12899 539 aaPredicted RBP33.38■■■□□ 2.93
DUSP9-201ENST00000342782 TNIKQ9UKE5 1360 aa33.35■■■□□ 2.93
DUSP9-201ENST00000342782 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
DUSP9-201ENST00000342782 RANGAP1P46060 587 aaPredicted RBP33.3■■■□□ 2.92
DUSP9-201ENST00000342782 MAGI1Q96QZ7 1491 aaPredicted RBP33.29■■■□□ 2.92
DUSP9-201ENST00000342782 FBLN2P98095 1184 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms