RNA–Protein interactions for RNA: ENST00000257013.8

RTL8C-201, Transcript of retrotransposon Gag like 8C, humanhuman

APPRIS P1 BASIC

Gene RTL8C, Length 1,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-201ENST00000257013 NISCHQ9Y2I1 1504 aa52.93■■■■■ 6.06
RTL8C-201ENST00000257013 CCDC180Q9P1Z9 1646 aa47■■■■■ 5.11
RTL8C-201ENST00000257013 ABCC9O60706 1549 aa45.72■■■■■ 4.91
RTL8C-201ENST00000257013 NACADO15069 1562 aa44.14■■■■■ 4.66
RTL8C-201ENST00000257013 ZCCHC6Q5VYS8 1495 aaKnown RBP44.14■■■■■ 4.66
RTL8C-201ENST00000257013 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
RTL8C-201ENST00000257013 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
RTL8C-201ENST00000257013 MYO15BQ96JP2 1530 aa43.99■■■■■ 4.63
RTL8C-201ENST00000257013 DCAF1Q9Y4B6 1507 aa43.86■■■■■ 4.61
RTL8C-201ENST00000257013 UNC13AQ9UPW8 1703 aa43.08■■■■■ 4.49
RTL8C-201ENST00000257013 SCRIBQ14160 1630 aa42.82■■■■■ 4.45
RTL8C-201ENST00000257013 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
RTL8C-201ENST00000257013 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
RTL8C-201ENST00000257013 SHROOM4Q9ULL8 1493 aa42.42■■■■■ 4.38
RTL8C-201ENST00000257013 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
RTL8C-201ENST00000257013 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.25
RTL8C-201ENST00000257013 CC2D2AQ9P2K1 1620 aa41.39■■■■■ 4.22
RTL8C-201ENST00000257013 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
RTL8C-201ENST00000257013 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
RTL8C-201ENST00000257013 SMARCA4P51532 1647 aa41.02■■■■■ 4.16
RTL8C-201ENST00000257013 MROH2BQ7Z745 1585 aa40.76■■■■■ 4.12
RTL8C-201ENST00000257013 ATAD2BQ9ULI0 1458 aa40.75■■■■■ 4.11
RTL8C-201ENST00000257013 SMARCA2P51531 1590 aa40.74■■■■■ 4.11
RTL8C-201ENST00000257013 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
RTL8C-201ENST00000257013 PEG3Q9GZU2 1588 aa40.65■■■■■ 4.1
RTL8C-201ENST00000257013 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
RTL8C-201ENST00000257013 BAZ1BQ9UIG0 1483 aaKnown RBP40.44■■■■■ 4.06
RTL8C-201ENST00000257013 RSF1Q96T23 1441 aaPredicted RBP40.39■■■■■ 4.06
RTL8C-201ENST00000257013 WIZO95785 1651 aa40.33■■■■■ 4.05
RTL8C-201ENST00000257013 TOP2AP11388 1531 aaKnown RBP39.96■■■■□ 3.99
RTL8C-201ENST00000257013 LAMC3Q9Y6N6 1575 aa39.62■■■■□ 3.93
RTL8C-201ENST00000257013 NESP48681 1621 aa39.61■■■■□ 3.93
RTL8C-201ENST00000257013 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
RTL8C-201ENST00000257013 SUPT5HO00267 1087 aaKnown RBP39.47■■■■□ 3.91
RTL8C-201ENST00000257013 CCDC88BA6NC98 1476 aa39.46■■■■□ 3.91
RTL8C-201ENST00000257013 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
RTL8C-201ENST00000257013 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
RTL8C-201ENST00000257013 CFTRP13569 1480 aa39.35■■■■□ 3.89
RTL8C-201ENST00000257013 KIF21AQ7Z4S6 1674 aa39.16■■■■□ 3.86
RTL8C-201ENST00000257013 FANCD2Q9BXW9 1451 aa39.07■■■■□ 3.85
RTL8C-201ENST00000257013 PRDM2Q13029 1718 aa39.07■■■■□ 3.85
RTL8C-201ENST00000257013 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
RTL8C-201ENST00000257013 CEP164Q9UPV0 1460 aa39.01■■■■□ 3.84
RTL8C-201ENST00000257013 CUX2O14529 1486 aa38.98■■■■□ 3.83
RTL8C-201ENST00000257013 MRC2Q9UBG0 1479 aa38.92■■■■□ 3.82
RTL8C-201ENST00000257013 WDR62O43379 1518 aa38.78■■■■□ 3.8
RTL8C-201ENST00000257013 URB2Q14146 1524 aaKnown RBP38.64■■■■□ 3.78
RTL8C-201ENST00000257013 DNAJC5Q9H3Z4 198 aa38.62■■■■□ 3.77
RTL8C-201ENST00000257013 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
RTL8C-201ENST00000257013 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
RTL8C-201ENST00000257013 DNMBPQ6XZF7 1577 aa38.45■■■■□ 3.75
RTL8C-201ENST00000257013 CUX1P39880 1505 aa38.23■■■■□ 3.71
RTL8C-201ENST00000257013 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
RTL8C-201ENST00000257013 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
RTL8C-201ENST00000257013 WRNQ14191 1432 aaPredicted RBP eCLIP38.09■■■■□ 3.69
RTL8C-201ENST00000257013 FGD5Q6ZNL6 1462 aa38.09■■■■□ 3.69
RTL8C-201ENST00000257013 TARBP1Q13395 1621 aaKnown RBP38.03■■■■□ 3.68
RTL8C-201ENST00000257013 SOGA1O94964 1423 aa38.01■■■■□ 3.68
RTL8C-201ENST00000257013 TOP2BQ02880 1626 aa37.99■■■■□ 3.67
RTL8C-201ENST00000257013 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
RTL8C-201ENST00000257013 RAD54L2Q9Y4B4 1467 aa37.96■■■■□ 3.67
RTL8C-201ENST00000257013 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
RTL8C-201ENST00000257013 ZNF608Q9ULD9 1512 aaPredicted RBP37.95■■■■□ 3.67
RTL8C-201ENST00000257013 EIF4G3O43432 1585 aaKnown RBP37.84■■■■□ 3.65
RTL8C-201ENST00000257013 WDR97A6NE52 1622 aa37.81■■■■□ 3.64
RTL8C-201ENST00000257013 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.642e-11■□□□□ 10.5
RTL8C-201ENST00000257013 ABCA10Q8WWZ4 1543 aa37.76■■■■□ 3.63
RTL8C-201ENST00000257013 TDRD9Q8NDG6 1382 aaKnown RBP37.74■■■■□ 3.63
RTL8C-201ENST00000257013 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
RTL8C-201ENST00000257013 ABCA5Q8WWZ7 1642 aa37.56■■■■□ 3.6
RTL8C-201ENST00000257013 GRIN2BQ13224 1484 aa37.55■■■■□ 3.6
RTL8C-201ENST00000257013 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
RTL8C-201ENST00000257013 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
RTL8C-201ENST00000257013 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
RTL8C-201ENST00000257013 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
RTL8C-201ENST00000257013 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
RTL8C-201ENST00000257013 TRIM41Q8WV44 630 aa37.32■■■■□ 3.56
RTL8C-201ENST00000257013 CHD1O14646 1710 aa37.31■■■■□ 3.56
RTL8C-201ENST00000257013 KIF27Q86VH2 1401 aa37.29■■■■□ 3.56
RTL8C-201ENST00000257013 SYNJ2O15056 1496 aa37.29■■■■□ 3.56
RTL8C-201ENST00000257013 FBLN2P98095 1184 aa37.28■■■■□ 3.56
RTL8C-201ENST00000257013 CHMP7Q8WUX9 453 aaPredicted RBP37.25■■■■□ 3.55
RTL8C-201ENST00000257013 ADAMTS12P58397 1594 aa37.19■■■■□ 3.54
RTL8C-201ENST00000257013 FHAD1B1AJZ9 1412 aa37.17■■■■□ 3.54
RTL8C-201ENST00000257013 IGF1RP08069 1367 aa37.1■■■■□ 3.53
RTL8C-201ENST00000257013 GRIN2AQ12879 1464 aa37.06■■■■□ 3.52
RTL8C-201ENST00000257013 CUL7Q14999 1698 aa37.02■■■■□ 3.52
RTL8C-201ENST00000257013 CHIC1Q5VXU3 224 aa36.98■■■■□ 3.51
RTL8C-201ENST00000257013 RUSC2Q8N2Y8 1516 aa36.95■■■■□ 3.5
RTL8C-201ENST00000257013 CLASP1Q7Z460 1538 aa36.94■■■■□ 3.5
RTL8C-201ENST00000257013 NUP160Q12769 1436 aa36.9■■■■□ 3.5
RTL8C-201ENST00000257013 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
RTL8C-201ENST00000257013 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
RTL8C-201ENST00000257013 ARHGEF11O15085 1522 aa36.75■■■■□ 3.47
RTL8C-201ENST00000257013 EEA1Q15075 1411 aa36.75■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RAPGEF2Q9Y4G8 1499 aa36.7■■■■□ 3.47
RTL8C-201ENST00000257013 CSRNP3Q8WYN3 585 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms