RNA–Protein interactions for RNA: ENST00000257013.8

RTL8C-201, Transcript of retrotransposon Gag like 8C, humanhuman

APPRIS P1 BASIC

Gene RTL8C, Length 1,181 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-201ENST00000257013 NISCHQ9Y2I1 1504 aa52.93■■■■■ 6.06
RTL8C-201ENST00000257013 CCDC180Q9P1Z9 1646 aa47■■■■■ 5.11
RTL8C-201ENST00000257013 ABCC9O60706 1549 aa45.72■■■■■ 4.91
RTL8C-201ENST00000257013 NACADO15069 1562 aa44.14■■■■■ 4.66
RTL8C-201ENST00000257013 ZCCHC6Q5VYS8 1495 aaKnown RBP44.14■■■■■ 4.66
RTL8C-201ENST00000257013 RB1CC1Q8TDY2 1594 aa44.14■■■■■ 4.66
RTL8C-201ENST00000257013 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
RTL8C-201ENST00000257013 MYO15BQ96JP2 1530 aa43.99■■■■■ 4.63
RTL8C-201ENST00000257013 DCAF1Q9Y4B6 1507 aa43.86■■■■■ 4.61
RTL8C-201ENST00000257013 UNC13AQ9UPW8 1703 aa43.08■■■■■ 4.49
RTL8C-201ENST00000257013 SCRIBQ14160 1630 aa42.82■■■■■ 4.45
RTL8C-201ENST00000257013 BICRAQ9NZM4 1560 aa42.75■■■■■ 4.43
RTL8C-201ENST00000257013 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
RTL8C-201ENST00000257013 SHROOM4Q9ULL8 1493 aa42.42■■■■■ 4.38
RTL8C-201ENST00000257013 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
RTL8C-201ENST00000257013 EIF4G1Q04637 1599 aaKnown RBP41.63■■■■■ 4.25
RTL8C-201ENST00000257013 CC2D2AQ9P2K1 1620 aa41.39■■■■■ 4.22
RTL8C-201ENST00000257013 CECR2Q9BXF3 1484 aa41.16■■■■■ 4.18
RTL8C-201ENST00000257013 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
RTL8C-201ENST00000257013 SMARCA4P51532 1647 aa41.02■■■■■ 4.16
RTL8C-201ENST00000257013 MROH2BQ7Z745 1585 aa40.76■■■■■ 4.12
RTL8C-201ENST00000257013 ATAD2BQ9ULI0 1458 aa40.75■■■■■ 4.11
RTL8C-201ENST00000257013 SMARCA2P51531 1590 aa40.74■■■■■ 4.11
RTL8C-201ENST00000257013 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
RTL8C-201ENST00000257013 PEG3Q9GZU2 1588 aa40.65■■■■■ 4.1
RTL8C-201ENST00000257013 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
RTL8C-201ENST00000257013 BAZ1BQ9UIG0 1483 aaKnown RBP40.44■■■■■ 4.06
RTL8C-201ENST00000257013 RSF1Q96T23 1441 aaPredicted RBP40.39■■■■■ 4.06
RTL8C-201ENST00000257013 WIZO95785 1651 aa40.33■■■■■ 4.05
RTL8C-201ENST00000257013 TOP2AP11388 1531 aaKnown RBP39.96■■■■□ 3.99
RTL8C-201ENST00000257013 LAMC3Q9Y6N6 1575 aa39.62■■■■□ 3.93
RTL8C-201ENST00000257013 NESP48681 1621 aa39.61■■■■□ 3.93
RTL8C-201ENST00000257013 CADPSQ9ULU8 1353 aa39.54■■■■□ 3.92
RTL8C-201ENST00000257013 SUPT5HO00267 1087 aaKnown RBP39.47■■■■□ 3.91
RTL8C-201ENST00000257013 CCDC88BA6NC98 1476 aa39.46■■■■□ 3.91
RTL8C-201ENST00000257013 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
RTL8C-201ENST00000257013 PDS5BQ9NTI5 1447 aa39.35■■■■□ 3.89
RTL8C-201ENST00000257013 CFTRP13569 1480 aa39.35■■■■□ 3.89
RTL8C-201ENST00000257013 KIF21AQ7Z4S6 1674 aa39.16■■■■□ 3.86
RTL8C-201ENST00000257013 FANCD2Q9BXW9 1451 aa39.07■■■■□ 3.85
RTL8C-201ENST00000257013 PRDM2Q13029 1718 aa39.07■■■■□ 3.85
RTL8C-201ENST00000257013 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
RTL8C-201ENST00000257013 CEP164Q9UPV0 1460 aa39.01■■■■□ 3.84
RTL8C-201ENST00000257013 CUX2O14529 1486 aa38.98■■■■□ 3.83
RTL8C-201ENST00000257013 MRC2Q9UBG0 1479 aa38.92■■■■□ 3.82
RTL8C-201ENST00000257013 WDR62O43379 1518 aa38.78■■■■□ 3.8
RTL8C-201ENST00000257013 URB2Q14146 1524 aaKnown RBP38.64■■■■□ 3.78
RTL8C-201ENST00000257013 DNAJC5Q9H3Z4 198 aa38.62■■■■□ 3.77
RTL8C-201ENST00000257013 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
RTL8C-201ENST00000257013 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
RTL8C-201ENST00000257013 DNMBPQ6XZF7 1577 aa38.45■■■■□ 3.75
RTL8C-201ENST00000257013 CUX1P39880 1505 aa38.23■■■■□ 3.71
RTL8C-201ENST00000257013 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
RTL8C-201ENST00000257013 POLA1P09884 1462 aaPredicted RBP38.15■■■■□ 3.7
RTL8C-201ENST00000257013 WRNQ14191 1432 aaPredicted RBP eCLIP38.09■■■■□ 3.69
RTL8C-201ENST00000257013 FGD5Q6ZNL6 1462 aa38.09■■■■□ 3.69
RTL8C-201ENST00000257013 TARBP1Q13395 1621 aaKnown RBP38.03■■■■□ 3.68
RTL8C-201ENST00000257013 SOGA1O94964 1423 aa38.01■■■■□ 3.68
RTL8C-201ENST00000257013 TOP2BQ02880 1626 aa37.99■■■■□ 3.67
RTL8C-201ENST00000257013 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
RTL8C-201ENST00000257013 RAD54L2Q9Y4B4 1467 aa37.96■■■■□ 3.67
RTL8C-201ENST00000257013 SYNJ1O43426 1573 aa37.95■■■■□ 3.67
RTL8C-201ENST00000257013 ZNF608Q9ULD9 1512 aaPredicted RBP37.95■■■■□ 3.67
RTL8C-201ENST00000257013 EIF4G3O43432 1585 aaKnown RBP37.84■■■■□ 3.65
RTL8C-201ENST00000257013 WDR97A6NE52 1622 aa37.81■■■■□ 3.64
RTL8C-201ENST00000257013 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.642e-11■□□□□ 10.5
RTL8C-201ENST00000257013 ABCA10Q8WWZ4 1543 aa37.76■■■■□ 3.63
RTL8C-201ENST00000257013 TDRD9Q8NDG6 1382 aaKnown RBP37.74■■■■□ 3.63
RTL8C-201ENST00000257013 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
RTL8C-201ENST00000257013 ABCA5Q8WWZ7 1642 aa37.56■■■■□ 3.6
RTL8C-201ENST00000257013 GRIN2BQ13224 1484 aa37.55■■■■□ 3.6
RTL8C-201ENST00000257013 PBRM1Q86U86 1689 aa37.47■■■■□ 3.59
RTL8C-201ENST00000257013 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
RTL8C-201ENST00000257013 MAGI1Q96QZ7 1491 aaPredicted RBP37.45■■■■□ 3.59
RTL8C-201ENST00000257013 OSCARQ8IYS5 282 aa37.38■■■■□ 3.57
RTL8C-201ENST00000257013 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
RTL8C-201ENST00000257013 TRIM41Q8WV44 630 aa37.32■■■■□ 3.56
RTL8C-201ENST00000257013 CHD1O14646 1710 aa37.31■■■■□ 3.56
RTL8C-201ENST00000257013 KIF27Q86VH2 1401 aa37.29■■■■□ 3.56
RTL8C-201ENST00000257013 SYNJ2O15056 1496 aa37.29■■■■□ 3.56
RTL8C-201ENST00000257013 FBLN2P98095 1184 aa37.28■■■■□ 3.56
RTL8C-201ENST00000257013 CHMP7Q8WUX9 453 aaPredicted RBP37.25■■■■□ 3.55
RTL8C-201ENST00000257013 ADAMTS12P58397 1594 aa37.19■■■■□ 3.54
RTL8C-201ENST00000257013 FHAD1B1AJZ9 1412 aa37.17■■■■□ 3.54
RTL8C-201ENST00000257013 IGF1RP08069 1367 aa37.1■■■■□ 3.53
RTL8C-201ENST00000257013 GRIN2AQ12879 1464 aa37.06■■■■□ 3.52
RTL8C-201ENST00000257013 CUL7Q14999 1698 aa37.02■■■■□ 3.52
RTL8C-201ENST00000257013 CHIC1Q5VXU3 224 aa36.98■■■■□ 3.51
RTL8C-201ENST00000257013 RUSC2Q8N2Y8 1516 aa36.95■■■■□ 3.5
RTL8C-201ENST00000257013 CLASP1Q7Z460 1538 aa36.94■■■■□ 3.5
RTL8C-201ENST00000257013 NUP160Q12769 1436 aa36.9■■■■□ 3.5
RTL8C-201ENST00000257013 CARMIL1Q5VZK9 1371 aa36.89■■■■□ 3.5
RTL8C-201ENST00000257013 CEP170Q5SW79 1584 aa36.84■■■■□ 3.49
RTL8C-201ENST00000257013 ARHGEF11O15085 1522 aa36.75■■■■□ 3.47
RTL8C-201ENST00000257013 EEA1Q15075 1411 aa36.75■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
RTL8C-201ENST00000257013 RAPGEF2Q9Y4G8 1499 aa36.7■■■■□ 3.47
RTL8C-201ENST00000257013 CSRNP3Q8WYN3 585 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms