RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 NISCHQ9Y2I1 1504 aa38.27■■■■□ 3.72
SIX5-201ENST00000317578 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
SIX5-201ENST00000317578 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
SIX5-201ENST00000317578 SUPT5HO00267 1087 aaKnown RBP33.43■■■□□ 2.94
SIX5-201ENST00000317578 HRCP23327 699 aa32.06■■■□□ 2.72
SIX5-201ENST00000317578 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
SIX5-201ENST00000317578 PELP1Q8IZL8 1130 aaKnown RBP31.9■■■□□ 2.7
SIX5-201ENST00000317578 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
SIX5-201ENST00000317578 ABCC9O60706 1549 aa31.84■■■□□ 2.69
SIX5-201ENST00000317578 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
SIX5-201ENST00000317578 EHMT2Q96KQ7 1210 aa31.59■■■□□ 2.65
SIX5-201ENST00000317578 PCGF6Q9BYE7 350 aa31.53■■■□□ 2.64
SIX5-201ENST00000317578 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
SIX5-201ENST00000317578 FAM9AQ8IZU1 332 aaPredicted RBP31.22■■■□□ 2.59
SIX5-201ENST00000317578 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
SIX5-201ENST00000317578 LOC105371045A0A1W2PR82 267 aa31.05■■■□□ 2.56
SIX5-201ENST00000317578 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
SIX5-201ENST00000317578 SCAF1Q9H7N4 1312 aaKnown RBP30.81■■■□□ 2.52
SIX5-201ENST00000317578 MYT1Q01538 1121 aa30.8■■■□□ 2.52
SIX5-201ENST00000317578 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
SIX5-201ENST00000317578 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
SIX5-201ENST00000317578 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
SIX5-201ENST00000317578 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
SIX5-201ENST00000317578 RSF1Q96T23 1441 aaPredicted RBP30.43■■■□□ 2.46
SIX5-201ENST00000317578 TTBK1Q5TCY1 1321 aaPredicted RBP30.28■■■□□ 2.44
SIX5-201ENST00000317578 NACADO15069 1562 aa30.12■■■□□ 2.41
SIX5-201ENST00000317578 RANGAP1P46060 587 aaPredicted RBP30.02■■■□□ 2.4
SIX5-201ENST00000317578 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
SIX5-201ENST00000317578 RB1CC1Q8TDY2 1594 aa29.96■■■□□ 2.39
SIX5-201ENST00000317578 TRIM26Q12899 539 aaPredicted RBP29.94■■■□□ 2.38
SIX5-201ENST00000317578 GTF3C3Q9Y5Q9 886 aa29.87■■■□□ 2.37
SIX5-201ENST00000317578 ZEB1P37275 1124 aaPredicted RBP29.87■■■□□ 2.37
SIX5-201ENST00000317578 ACIN1Q9UKV3 1341 aaKnown RBP29.84■■■□□ 2.37
SIX5-201ENST00000317578 NEUROD1Q13562 356 aa29.83■■■□□ 2.37
SIX5-201ENST00000317578 WIZO95785 1651 aa29.73■■■□□ 2.35
SIX5-201ENST00000317578 UBTFP17480 764 aaKnown RBP29.69■■■□□ 2.34
SIX5-201ENST00000317578 CENPBP07199 599 aaPredicted RBP29.57■■■□□ 2.32
SIX5-201ENST00000317578 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.29
SIX5-201ENST00000317578 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
SIX5-201ENST00000317578 ABCC8Q09428 1581 aa29.28■■■□□ 2.28
SIX5-201ENST00000317578 YTHDC1Q96MU7 727 aaKnown RBP29.2■■■□□ 2.27
SIX5-201ENST00000317578 DIEXFQ68CQ4 756 aaKnown RBP29.13■■■□□ 2.25
SIX5-201ENST00000317578 CSRNP3Q8WYN3 585 aa29.13■■■□□ 2.25
SIX5-201ENST00000317578 SMARCA4P51532 1647 aa29.1■■■□□ 2.25
SIX5-201ENST00000317578 SOGA1O94964 1423 aa29.09■■■□□ 2.25
SIX5-201ENST00000317578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.05■■■□□ 2.24
SIX5-201ENST00000317578 BCL11AQ9H165 835 aa29.03■■■□□ 2.24
SIX5-201ENST00000317578 CCER1Q8TC90 406 aaPredicted RBP28.98■■■□□ 2.23
SIX5-201ENST00000317578 UNC13AQ9UPW8 1703 aa28.96■■■□□ 2.23
SIX5-201ENST00000317578 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
SIX5-201ENST00000317578 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.22
SIX5-201ENST00000317578 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
SIX5-201ENST00000317578 TOP2AP11388 1531 aaKnown RBP28.92■■■□□ 2.22
SIX5-201ENST00000317578 APLP2Q06481 763 aa28.91■■■□□ 2.22
SIX5-201ENST00000317578 ATP1B4Q9UN42 357 aaPredicted RBP28.86■■■□□ 2.21
SIX5-201ENST00000317578 HNRNPUL2Q1KMD3 747 aaKnown RBP28.85■■■□□ 2.21
SIX5-201ENST00000317578 ATAD2BQ9ULI0 1458 aa28.82■■■□□ 2.2
SIX5-201ENST00000317578 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
SIX5-201ENST00000317578 WRNQ14191 1432 aaPredicted RBP eCLIP28.81■■■□□ 2.2
SIX5-201ENST00000317578 ITGAEP38570 1179 aa28.63■■■□□ 2.17
SIX5-201ENST00000317578 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
SIX5-201ENST00000317578 CEP162Q5TB80 1403 aa28.58■■■□□ 2.17
SIX5-201ENST00000317578 ANP32EQ9BTT0 268 aa28.52■■■□□ 2.16
SIX5-201ENST00000317578 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
SIX5-201ENST00000317578 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
SIX5-201ENST00000317578 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
SIX5-201ENST00000317578 MIER1Q8N108 512 aa28.3■■■□□ 2.12
SIX5-201ENST00000317578 CLIP1P30622 1438 aa28.29■■■□□ 2.12
SIX5-201ENST00000317578 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
SIX5-201ENST00000317578 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
SIX5-201ENST00000317578 ZNF316A6NFI3 1004 aaPredicted RBP28.26■■■□□ 2.12
SIX5-201ENST00000317578 PRKCSHP14314 528 aaPredicted RBP28.26■■■□□ 2.11
SIX5-201ENST00000317578 RAPGEF2Q9Y4G8 1499 aa28.22■■■□□ 2.11
SIX5-201ENST00000317578 ARID3CA6NKF2 412 aa28.19■■■□□ 2.1
SIX5-201ENST00000317578 EEA1Q15075 1411 aa28.14■■■□□ 2.1
SIX5-201ENST00000317578 NCAPD3P42695 1498 aa28.13■■■□□ 2.09
SIX5-201ENST00000317578 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
SIX5-201ENST00000317578 TSHZ2Q9NRE2 1034 aa28.1■■■□□ 2.09
SIX5-201ENST00000317578 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
SIX5-201ENST00000317578 SUPT16HQ9Y5B9 1047 aaKnown RBP28.05■■■□□ 2.08
SIX5-201ENST00000317578 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
SIX5-201ENST00000317578 CUX2O14529 1486 aa28.02■■■□□ 2.08
SIX5-201ENST00000317578 KIF27Q86VH2 1401 aa27.99■■■□□ 2.07
SIX5-201ENST00000317578 FAM50AQ14320 339 aaKnown RBP27.99■■■□□ 2.07
SIX5-201ENST00000317578 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
SIX5-201ENST00000317578 NESP48681 1621 aa27.98■■■□□ 2.07
SIX5-201ENST00000317578 BCANQ96GW7 911 aa27.92■■■□□ 2.06
SIX5-201ENST00000317578 FBLN2P98095 1184 aa27.9■■■□□ 2.06
SIX5-201ENST00000317578 CC2D2AQ9P2K1 1620 aa27.87■■■□□ 2.05
SIX5-201ENST00000317578 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
SIX5-201ENST00000317578 CUX1P39880 1505 aa27.85■■■□□ 2.05
SIX5-201ENST00000317578 CFTRP13569 1480 aa27.83■■■□□ 2.05
SIX5-201ENST00000317578 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
SIX5-201ENST00000317578 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
SIX5-201ENST00000317578 VPS8Q8N3P4 1428 aa27.75■■■□□ 2.03
SIX5-201ENST00000317578 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
SIX5-201ENST00000317578 IGF1RP08069 1367 aa27.73■■■□□ 2.03
SIX5-201ENST00000317578 HMGXB3Q12766 1538 aa27.7■■■□□ 2.02
SIX5-201ENST00000317578 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
SIX5-201ENST00000317578 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms