RNA–Protein interactions for RNA: ENST00000409127.1

CCDC115-202, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2 BASIC

Gene CCDC115, Length 1,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-202ENST00000409127 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
CCDC115-202ENST00000409127 CCDC180Q9P1Z9 1646 aa46.76■■■■■ 5.08
CCDC115-202ENST00000409127 ABCC9O60706 1549 aa45.85■■■■■ 4.93
CCDC115-202ENST00000409127 DCAF8L2P0C7V8 631 aa44.3■■■■■ 4.68
CCDC115-202ENST00000409127 RB1CC1Q8TDY2 1594 aa44.12■■■■■ 4.65
CCDC115-202ENST00000409127 NACADO15069 1562 aa44.09■■■■■ 4.65
CCDC115-202ENST00000409127 ZCCHC6Q5VYS8 1495 aaKnown RBP43.88■■■■■ 4.61
CCDC115-202ENST00000409127 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
CCDC115-202ENST00000409127 DCAF1Q9Y4B6 1507 aa43.63■■■■■ 4.58
CCDC115-202ENST00000409127 PABPN1Q86U42 306 aaKnown RBP eCLIP42.94■■■■■ 4.46
CCDC115-202ENST00000409127 UNC13AQ9UPW8 1703 aa42.8■■■■■ 4.44
CCDC115-202ENST00000409127 SCRIBQ14160 1630 aa42.68■■■■■ 4.42
CCDC115-202ENST00000409127 BICRAQ9NZM4 1560 aa42.63■■■■■ 4.41
CCDC115-202ENST00000409127 SHROOM4Q9ULL8 1493 aa42.38■■■■■ 4.38
CCDC115-202ENST00000409127 DNAJC5BQ9UF47 199 aa42.06■■■■■ 4.32
CCDC115-202ENST00000409127 EIF4G1Q04637 1599 aaKnown RBP41.59■■■■■ 4.25
CCDC115-202ENST00000409127 CC2D2AQ9P2K1 1620 aa41.4■■■■■ 4.22
CCDC115-202ENST00000409127 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
CCDC115-202ENST00000409127 BAZ1AQ9NRL2 1556 aaPredicted RBP40.89■■■■■ 4.14
CCDC115-202ENST00000409127 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
CCDC115-202ENST00000409127 NCAPD3P42695 1498 aa40.71■■■■■ 4.11
CCDC115-202ENST00000409127 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
CCDC115-202ENST00000409127 SMARCA2P51531 1590 aa40.67■■■■■ 4.1
CCDC115-202ENST00000409127 MROH2BQ7Z745 1585 aa40.58■■■■■ 4.09
CCDC115-202ENST00000409127 PEG3Q9GZU2 1588 aa40.45■■■■■ 4.07
CCDC115-202ENST00000409127 HMGXB3Q12766 1538 aa40.43■■■■■ 4.06
CCDC115-202ENST00000409127 BAZ1BQ9UIG0 1483 aaKnown RBP40.4■■■■■ 4.06
CCDC115-202ENST00000409127 RSF1Q96T23 1441 aaPredicted RBP40.21■■■■■ 4.03
CCDC115-202ENST00000409127 WIZO95785 1651 aa40.08■■■■■ 4.01
CCDC115-202ENST00000409127 TOP2AP11388 1531 aaKnown RBP39.75■■■■□ 3.95
CCDC115-202ENST00000409127 ERCC6Q03468 1493 aa39.62■■■■□ 3.93
CCDC115-202ENST00000409127 NESP48681 1621 aa39.62■■■■□ 3.93
CCDC115-202ENST00000409127 LAMC3Q9Y6N6 1575 aa39.58■■■■□ 3.93
CCDC115-202ENST00000409127 CADPSQ9ULU8 1353 aa39.58■■■■□ 3.93
CCDC115-202ENST00000409127 PDS5BQ9NTI5 1447 aa39.47■■■■□ 3.91
CCDC115-202ENST00000409127 SUPT5HO00267 1087 aaKnown RBP39.35■■■■□ 3.89
CCDC115-202ENST00000409127 CCDC88BA6NC98 1476 aa39.32■■■■□ 3.89
CCDC115-202ENST00000409127 CFTRP13569 1480 aa39.28■■■■□ 3.88
CCDC115-202ENST00000409127 CUX2O14529 1486 aa39.15■■■■□ 3.86
CCDC115-202ENST00000409127 FANCD2Q9BXW9 1451 aa39.06■■■■□ 3.84
CCDC115-202ENST00000409127 KIF21AQ7Z4S6 1674 aa39.03■■■■□ 3.84
CCDC115-202ENST00000409127 CEP164Q9UPV0 1460 aa39.02■■■■□ 3.84
CCDC115-202ENST00000409127 MRC2Q9UBG0 1479 aa38.95■■■■□ 3.83
CCDC115-202ENST00000409127 THOC2Q8NI27 1593 aaKnown RBP38.93■■■■□ 3.82
CCDC115-202ENST00000409127 WDR62O43379 1518 aa38.75■■■■□ 3.79
CCDC115-202ENST00000409127 PRDM2Q13029 1718 aa38.72■■■■□ 3.79
CCDC115-202ENST00000409127 URB2Q14146 1524 aaKnown RBP38.58■■■■□ 3.77
CCDC115-202ENST00000409127 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
CCDC115-202ENST00000409127 TOPBP1Q92547 1522 aa38.39■■■■□ 3.74
CCDC115-202ENST00000409127 DNMBPQ6XZF7 1577 aa38.33■■■■□ 3.73
CCDC115-202ENST00000409127 IFT140Q96RY7 1462 aa38.23■■■■□ 3.71
CCDC115-202ENST00000409127 POLA1P09884 1462 aaPredicted RBP38.08■■■■□ 3.69
CCDC115-202ENST00000409127 CUX1P39880 1505 aa38.07■■■■□ 3.68
CCDC115-202ENST00000409127 SOGA1O94964 1423 aa38.04■■■■□ 3.68
CCDC115-202ENST00000409127 DNAJC5Q9H3Z4 198 aa38.01■■■■□ 3.68
CCDC115-202ENST00000409127 FGD5Q6ZNL6 1462 aa37.99■■■■□ 3.67
CCDC115-202ENST00000409127 WRNQ14191 1432 aaPredicted RBP eCLIP37.95■■■■□ 3.67
CCDC115-202ENST00000409127 ZNF608Q9ULD9 1512 aaPredicted RBP37.95■■■■□ 3.67
CCDC115-202ENST00000409127 RAD54L2Q9Y4B4 1467 aa37.9■■■■□ 3.66
CCDC115-202ENST00000409127 TARBP1Q13395 1621 aaKnown RBP37.88■■■■□ 3.65
CCDC115-202ENST00000409127 AQRO60306 1485 aaKnown RBP eCLIP37.81■■■■□ 3.645e-7■■■■■ 27.1
CCDC115-202ENST00000409127 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
CCDC115-202ENST00000409127 TOP2BQ02880 1626 aa37.75■■■■□ 3.63
CCDC115-202ENST00000409127 EIF4G3O43432 1585 aaKnown RBP37.74■■■■□ 3.63
CCDC115-202ENST00000409127 SYNJ1O43426 1573 aa37.69■■■■□ 3.62
CCDC115-202ENST00000409127 OSCARQ8IYS5 282 aa37.69■■■■□ 3.62
CCDC115-202ENST00000409127 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
CCDC115-202ENST00000409127 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
CCDC115-202ENST00000409127 ABCA10Q8WWZ4 1543 aa37.64■■■■□ 3.62
CCDC115-202ENST00000409127 GRIN2BQ13224 1484 aa37.56■■■■□ 3.6
CCDC115-202ENST00000409127 GAPVD1Q14C86 1478 aa37.55■■■■□ 3.6
CCDC115-202ENST00000409127 FBLN2P98095 1184 aa37.52■■■■□ 3.6
CCDC115-202ENST00000409127 CHMP7Q8WUX9 453 aaPredicted RBP37.44■■■■□ 3.58
CCDC115-202ENST00000409127 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
CCDC115-202ENST00000409127 MAGI1Q96QZ7 1491 aaPredicted RBP37.43■■■■□ 3.58
CCDC115-202ENST00000409127 ABCA5Q8WWZ7 1642 aa37.36■■■■□ 3.57
CCDC115-202ENST00000409127 SYNJ2O15056 1496 aa37.29■■■■□ 3.56
CCDC115-202ENST00000409127 PBRM1Q86U86 1689 aa37.25■■■■□ 3.55
CCDC115-202ENST00000409127 KIF27Q86VH2 1401 aa37.23■■■■□ 3.55
CCDC115-202ENST00000409127 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
CCDC115-202ENST00000409127 ERICH3Q5RHP9 1530 aa37.2■■■■□ 3.55
CCDC115-202ENST00000409127 CHD1O14646 1710 aa37.18■■■■□ 3.54
CCDC115-202ENST00000409127 FHAD1B1AJZ9 1412 aa37.15■■■■□ 3.54
CCDC115-202ENST00000409127 ADAMTS12P58397 1594 aa37.04■■■■□ 3.52
CCDC115-202ENST00000409127 IGF1RP08069 1367 aa37.03■■■■□ 3.52
CCDC115-202ENST00000409127 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
CCDC115-202ENST00000409127 CLASP1Q7Z460 1538 aa36.88■■■■□ 3.49
CCDC115-202ENST00000409127 NUP160Q12769 1436 aa36.85■■■■□ 3.49
CCDC115-202ENST00000409127 ARHGEF11O15085 1522 aa36.85■■■■□ 3.49
CCDC115-202ENST00000409127 CARMIL1Q5VZK9 1371 aa36.85■■■■□ 3.49
CCDC115-202ENST00000409127 CUL7Q14999 1698 aa36.8■■■■□ 3.48
CCDC115-202ENST00000409127 RIMBP3CA6NJZ7 1639 aa36.78■■■■□ 3.48
CCDC115-202ENST00000409127 RIMBP3BA6NNM3 1639 aa36.78■■■■□ 3.48
CCDC115-202ENST00000409127 RIMBP3Q9UFD9 1639 aa36.78■■■■□ 3.48
CCDC115-202ENST00000409127 CEP170Q5SW79 1584 aa36.73■■■■□ 3.47
CCDC115-202ENST00000409127 RUSC2Q8N2Y8 1516 aa36.7■■■■□ 3.47
CCDC115-202ENST00000409127 CYB5RLQ6IPT4 315 aa36.7■■■■□ 3.47
CCDC115-202ENST00000409127 CHIC1Q5VXU3 224 aa36.68■■■■□ 3.46
CCDC115-202ENST00000409127 JPH4Q96JJ6 628 aa36.63■■■■□ 3.45
CCDC115-202ENST00000409127 RAPGEF2Q9Y4G8 1499 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms