RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 NISCHQ9Y2I1 1504 aa39.63■■■■□ 3.93
PHLDA3-202ENST00000367311 SHROOM4Q9ULL8 1493 aa35■■■■□ 3.19
PHLDA3-202ENST00000367311 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
PHLDA3-202ENST00000367311 MYO15BQ96JP2 1530 aa33.7■■■□□ 2.98
PHLDA3-202ENST00000367311 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.96
PHLDA3-202ENST00000367311 DCAF8L2P0C7V8 631 aa33.54■■■□□ 2.96
PHLDA3-202ENST00000367311 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
PHLDA3-202ENST00000367311 HRCP23327 699 aa33.53■■■□□ 2.96
PHLDA3-202ENST00000367311 PCGF6Q9BYE7 350 aa33.34■■■□□ 2.93
PHLDA3-202ENST00000367311 PPARGC1BQ86YN6 1023 aaKnown RBP33.16■■■□□ 2.9
PHLDA3-202ENST00000367311 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
PHLDA3-202ENST00000367311 LOC105371045A0A1W2PR82 267 aa32.92■■■□□ 2.86
PHLDA3-202ENST00000367311 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
PHLDA3-202ENST00000367311 PELP1Q8IZL8 1130 aaKnown RBP32.25■■■□□ 2.75
PHLDA3-202ENST00000367311 TRIM26Q12899 539 aaPredicted RBP32.19■■■□□ 2.74
PHLDA3-202ENST00000367311 EHMT2Q96KQ7 1210 aa32.08■■■□□ 2.73
PHLDA3-202ENST00000367311 FAM9AQ8IZU1 332 aaPredicted RBP32.03■■■□□ 2.72
PHLDA3-202ENST00000367311 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
PHLDA3-202ENST00000367311 ABCC9O60706 1549 aa31.78■■■□□ 2.68
PHLDA3-202ENST00000367311 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
PHLDA3-202ENST00000367311 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
PHLDA3-202ENST00000367311 SCAF1Q9H7N4 1312 aaKnown RBP31.71■■■□□ 2.67
PHLDA3-202ENST00000367311 RB1CC1Q8TDY2 1594 aa31.59■■■□□ 2.65
PHLDA3-202ENST00000367311 ZEB1P37275 1124 aaPredicted RBP31.53■■■□□ 2.64
PHLDA3-202ENST00000367311 CECR2Q9BXF3 1484 aa31.22■■■□□ 2.59
PHLDA3-202ENST00000367311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
PHLDA3-202ENST00000367311 TTBK1Q5TCY1 1321 aaPredicted RBP31.12■■■□□ 2.57
PHLDA3-202ENST00000367311 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
PHLDA3-202ENST00000367311 CCER1Q8TC90 406 aaPredicted RBP30.97■■■□□ 2.55
PHLDA3-202ENST00000367311 MYT1Q01538 1121 aa30.95■■■□□ 2.55
PHLDA3-202ENST00000367311 ACIN1Q9UKV3 1341 aaKnown RBP30.94■■■□□ 2.54
PHLDA3-202ENST00000367311 WIZO95785 1651 aa30.94■■■□□ 2.54
PHLDA3-202ENST00000367311 NEUROD1Q13562 356 aa30.87■■■□□ 2.53
PHLDA3-202ENST00000367311 GTF3C3Q9Y5Q9 886 aa30.7■■■□□ 2.5
PHLDA3-202ENST00000367311 DIEXFQ68CQ4 756 aaKnown RBP30.62■■■□□ 2.49
PHLDA3-202ENST00000367311 ABCC8Q09428 1581 aa30.6■■■□□ 2.49
PHLDA3-202ENST00000367311 NACADO15069 1562 aa30.54■■■□□ 2.48
PHLDA3-202ENST00000367311 CENPBP07199 599 aaPredicted RBP30.54■■■□□ 2.48
PHLDA3-202ENST00000367311 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
PHLDA3-202ENST00000367311 EIF4G1Q04637 1599 aaKnown RBP30.48■■■□□ 2.47
PHLDA3-202ENST00000367311 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
PHLDA3-202ENST00000367311 SOGA1O94964 1423 aa30.43■■■□□ 2.46
PHLDA3-202ENST00000367311 CEP162Q5TB80 1403 aa30.4■■■□□ 2.46
PHLDA3-202ENST00000367311 UBTFP17480 764 aaKnown RBP30.34■■■□□ 2.45
PHLDA3-202ENST00000367311 RUSC2Q8N2Y8 1516 aa30.33■■■□□ 2.45
PHLDA3-202ENST00000367311 YTHDC1Q96MU7 727 aaKnown RBP30.3■■■□□ 2.44
PHLDA3-202ENST00000367311 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
PHLDA3-202ENST00000367311 CSRNP3Q8WYN3 585 aa30.17■■■□□ 2.42
PHLDA3-202ENST00000367311 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
PHLDA3-202ENST00000367311 HNRNPUL2Q1KMD3 747 aaKnown RBP30.16■■■□□ 2.42
PHLDA3-202ENST00000367311 TNIKQ9UKE5 1360 aa30.14■■■□□ 2.42
PHLDA3-202ENST00000367311 ZNF316A6NFI3 1004 aaPredicted RBP30.14■■■□□ 2.42
PHLDA3-202ENST00000367311 SMARCA2P51531 1590 aa30.14■■■□□ 2.42
PHLDA3-202ENST00000367311 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
PHLDA3-202ENST00000367311 RANGAP1P46060 587 aaPredicted RBP30.05■■■□□ 2.4
PHLDA3-202ENST00000367311 MIER1Q8N108 512 aa30.01■■■□□ 2.4
PHLDA3-202ENST00000367311 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
PHLDA3-202ENST00000367311 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
PHLDA3-202ENST00000367311 EEA1Q15075 1411 aa29.79■■■□□ 2.36
PHLDA3-202ENST00000367311 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
PHLDA3-202ENST00000367311 CLIP1P30622 1438 aa29.7■■■□□ 2.34
PHLDA3-202ENST00000367311 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
PHLDA3-202ENST00000367311 APLP2Q06481 763 aa29.6■■■□□ 2.33
PHLDA3-202ENST00000367311 CEP164Q9UPV0 1460 aa29.6■■■□□ 2.33
PHLDA3-202ENST00000367311 RAPGEF2Q9Y4G8 1499 aa29.57■■■□□ 2.32
PHLDA3-202ENST00000367311 VPS8Q8N3P4 1428 aa29.53■■■□□ 2.32
PHLDA3-202ENST00000367311 KIF21BO75037 1637 aa29.45■■■□□ 2.31
PHLDA3-202ENST00000367311 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
PHLDA3-202ENST00000367311 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
PHLDA3-202ENST00000367311 DHX57Q6P158 1386 aaKnown RBP29.3■■■□□ 2.28
PHLDA3-202ENST00000367311 ITGAEP38570 1179 aa29.26■■■□□ 2.27
PHLDA3-202ENST00000367311 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
PHLDA3-202ENST00000367311 SUPT16HQ9Y5B9 1047 aaKnown RBP29.22■■■□□ 2.27
PHLDA3-202ENST00000367311 ATAD2BQ9ULI0 1458 aa29.22■■■□□ 2.27
PHLDA3-202ENST00000367311 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
PHLDA3-202ENST00000367311 KCNH8Q96L42 1107 aa29.14■■■□□ 2.26
PHLDA3-202ENST00000367311 ARAP1Q96P48 1450 aa29.13■■■□□ 2.25
PHLDA3-202ENST00000367311 ANP32EQ9BTT0 268 aa29.12■■■□□ 2.25
PHLDA3-202ENST00000367311 CLSPNQ9HAW4 1339 aa29.12■■■□□ 2.25
PHLDA3-202ENST00000367311 TSHZ2Q9NRE2 1034 aa29.08■■■□□ 2.25
PHLDA3-202ENST00000367311 BCL11AQ9H165 835 aa29.04■■■□□ 2.24
PHLDA3-202ENST00000367311 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
PHLDA3-202ENST00000367311 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
PHLDA3-202ENST00000367311 BCANQ96GW7 911 aa28.91■■■□□ 2.22
PHLDA3-202ENST00000367311 RRBP1Q9P2E9 1410 aaKnown RBP28.87■■■□□ 2.21
PHLDA3-202ENST00000367311 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
PHLDA3-202ENST00000367311 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
PHLDA3-202ENST00000367311 BIVM-ERCC5R4GMW8 1640 aa28.82■■■□□ 2.2
PHLDA3-202ENST00000367311 CUX1P39880 1505 aa28.81■■■□□ 2.2
PHLDA3-202ENST00000367311 HIRIP3Q9BW71 556 aaPredicted RBP28.81■■■□□ 2.2
PHLDA3-202ENST00000367311 SIN3AQ96ST3 1273 aa28.79■■■□□ 2.2
PHLDA3-202ENST00000367311 ARHGAP35Q9NRY4 1499 aa28.79■■■□□ 2.2
PHLDA3-202ENST00000367311 RAB3GAP2Q9H2M9 1393 aa28.79■■■□□ 2.2
PHLDA3-202ENST00000367311 DDX10Q13206 875 aaKnown RBP28.76■■■□□ 2.2
PHLDA3-202ENST00000367311 KIF27Q86VH2 1401 aa28.73■■■□□ 2.19
PHLDA3-202ENST00000367311 MAPKBP1O60336 1514 aa28.69■■■□□ 2.18
PHLDA3-202ENST00000367311 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
PHLDA3-202ENST00000367311 P3H3Q8IVL6 736 aa28.68■■■□□ 2.18
PHLDA3-202ENST00000367311 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
PHLDA3-202ENST00000367311 CUX2O14529 1486 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms