RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NISCHQ9Y2I1 1504 aa49.77■■■■■ 5.56
CCDC7-201ENST00000277657 CCDC180Q9P1Z9 1646 aa43.32■■■■■ 4.53
CCDC7-201ENST00000277657 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
CCDC7-201ENST00000277657 DCAF1Q9Y4B6 1507 aa41.18■■■■■ 4.18
CCDC7-201ENST00000277657 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
CCDC7-201ENST00000277657 ABCC9O60706 1549 aa40.77■■■■■ 4.12
CCDC7-201ENST00000277657 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
CCDC7-201ENST00000277657 MYO15BQ96JP2 1530 aa40.64■■■■■ 4.1
CCDC7-201ENST00000277657 NACADO15069 1562 aa40.31■■■■■ 4.04
CCDC7-201ENST00000277657 RB1CC1Q8TDY2 1594 aa39.9■■■■□ 3.98
CCDC7-201ENST00000277657 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
CCDC7-201ENST00000277657 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
CCDC7-201ENST00000277657 UNC13AQ9UPW8 1703 aa39.14■■■■□ 3.86
CCDC7-201ENST00000277657 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
CCDC7-201ENST00000277657 RSF1Q96T23 1441 aaPredicted RBP38.68■■■■□ 3.78
CCDC7-201ENST00000277657 CECR2Q9BXF3 1484 aa38.65■■■■□ 3.78
CCDC7-201ENST00000277657 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.75
CCDC7-201ENST00000277657 MROH2BQ7Z745 1585 aa38.46■■■■□ 3.75
CCDC7-201ENST00000277657 BAZ1AQ9NRL2 1556 aaPredicted RBP38.41■■■■□ 3.74
CCDC7-201ENST00000277657 SMARCA4P51532 1647 aa38.22■■■■□ 3.71
CCDC7-201ENST00000277657 WIZO95785 1651 aa38.14■■■■□ 3.7
CCDC7-201ENST00000277657 PEG3Q9GZU2 1588 aa37.78■■■■□ 3.64
CCDC7-201ENST00000277657 TOP2AP11388 1531 aaKnown RBP37.76■■■■□ 3.63
CCDC7-201ENST00000277657 CHIC1Q5VXU3 224 aa37.66■■■■□ 3.62
CCDC7-201ENST00000277657 ATAD2BQ9ULI0 1458 aa37.55■■■■□ 3.6
CCDC7-201ENST00000277657 EIF4G1Q04637 1599 aaKnown RBP37.53■■■■□ 3.6
CCDC7-201ENST00000277657 SMARCA2P51531 1590 aa37.52■■■■□ 3.6
CCDC7-201ENST00000277657 CCDC88BA6NC98 1476 aa37.37■■■■□ 3.57
CCDC7-201ENST00000277657 BAZ1BQ9UIG0 1483 aaKnown RBP37.33■■■■□ 3.57
CCDC7-201ENST00000277657 NCAPD3P42695 1498 aa37.21■■■■□ 3.55
CCDC7-201ENST00000277657 HMGXB3Q12766 1538 aa37.17■■■■□ 3.54
CCDC7-201ENST00000277657 CC2D2AQ9P2K1 1620 aa36.93■■■■□ 3.5
CCDC7-201ENST00000277657 TRIM41Q8WV44 630 aa36.85■■■■□ 3.49
CCDC7-201ENST00000277657 ABCC8Q09428 1581 aa36.62■■■■□ 3.45
CCDC7-201ENST00000277657 CFTRP13569 1480 aa36.44■■■■□ 3.42
CCDC7-201ENST00000277657 WRNQ14191 1432 aaPredicted RBP eCLIP36.38■■■■□ 3.41
CCDC7-201ENST00000277657 PRDM2Q13029 1718 aa36.25■■■■□ 3.39
CCDC7-201ENST00000277657 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
CCDC7-201ENST00000277657 SYNJ1O43426 1573 aa36.24■■■■□ 3.39
CCDC7-201ENST00000277657 LOC105371045A0A1W2PR82 267 aa36.2■■■■□ 3.38
CCDC7-201ENST00000277657 FAM9AQ8IZU1 332 aaPredicted RBP36.15■■■■□ 3.38
CCDC7-201ENST00000277657 TOP2BQ02880 1626 aa36.09■■■■□ 3.37
CCDC7-201ENST00000277657 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
CCDC7-201ENST00000277657 SOGA1O94964 1423 aa35.98■■■■□ 3.35
CCDC7-201ENST00000277657 EEA1Q15075 1411 aa35.96■■■■□ 3.35
CCDC7-201ENST00000277657 DNAJC5BQ9UF47 199 aa35.95■■■■□ 3.35
CCDC7-201ENST00000277657 CUX1P39880 1505 aa35.95■■■■□ 3.35
CCDC7-201ENST00000277657 LAMC3Q9Y6N6 1575 aa35.9■■■■□ 3.34
CCDC7-201ENST00000277657 NESP48681 1621 aa35.87■■■■□ 3.33
CCDC7-201ENST00000277657 RUSC2Q8N2Y8 1516 aa35.85■■■■□ 3.33
CCDC7-201ENST00000277657 FANCD2Q9BXW9 1451 aa35.84■■■■□ 3.33
CCDC7-201ENST00000277657 CSRNP3Q8WYN3 585 aa35.73■■■■□ 3.31
CCDC7-201ENST00000277657 PDS5BQ9NTI5 1447 aa35.6■■■■□ 3.29
CCDC7-201ENST00000277657 EHMT2Q96KQ7 1210 aa35.6■■■■□ 3.29
CCDC7-201ENST00000277657 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
CCDC7-201ENST00000277657 DNMBPQ6XZF7 1577 aa35.57■■■■□ 3.28
CCDC7-201ENST00000277657 FGD5Q6ZNL6 1462 aa35.51■■■■□ 3.27
CCDC7-201ENST00000277657 KIF21BO75037 1637 aa35.49■■■■□ 3.27
CCDC7-201ENST00000277657 TOPBP1Q92547 1522 aa35.49■■■■□ 3.27
CCDC7-201ENST00000277657 GOLGA3Q08378 1498 aa35.46■■■■□ 3.27
CCDC7-201ENST00000277657 KIF21AQ7Z4S6 1674 aa35.44■■■■□ 3.26
CCDC7-201ENST00000277657 KIF27Q86VH2 1401 aa35.43■■■■□ 3.26
CCDC7-201ENST00000277657 URB2Q14146 1524 aaKnown RBP35.4■■■■□ 3.26
CCDC7-201ENST00000277657 TNIKQ9UKE5 1360 aa35.39■■■■□ 3.26
CCDC7-201ENST00000277657 POLA1P09884 1462 aaPredicted RBP35.33■■■■□ 3.25
CCDC7-201ENST00000277657 CUX2O14529 1486 aa35.3■■■■□ 3.24
CCDC7-201ENST00000277657 PRXQ9BXM0 1461 aa35.28■■■■□ 3.24
CCDC7-201ENST00000277657 RAPGEF2Q9Y4G8 1499 aa35.25■■■■□ 3.23
CCDC7-201ENST00000277657 UBTFP17480 764 aaKnown RBP35.24■■■■□ 3.23
CCDC7-201ENST00000277657 ERICH3Q5RHP9 1530 aa35.23■■■■□ 3.23
CCDC7-201ENST00000277657 ABCA10Q8WWZ4 1543 aa35.22■■■■□ 3.23
CCDC7-201ENST00000277657 CEP162Q5TB80 1403 aa35.2■■■■□ 3.23
CCDC7-201ENST00000277657 RAD54L2Q9Y4B4 1467 aa35.2■■■■□ 3.23
CCDC7-201ENST00000277657 MRC2Q9UBG0 1479 aa35.14■■■■□ 3.22
CCDC7-201ENST00000277657 IGF1RP08069 1367 aa35.13■■■■□ 3.21
CCDC7-201ENST00000277657 WDR97A6NE52 1622 aa35.1■■■■□ 3.21
CCDC7-201ENST00000277657 WDR62O43379 1518 aa34.97■■■■□ 3.19
CCDC7-201ENST00000277657 TARBP1Q13395 1621 aaKnown RBP34.96■■■■□ 3.19
CCDC7-201ENST00000277657 CARMIL1Q5VZK9 1371 aa34.93■■■■□ 3.18
CCDC7-201ENST00000277657 ABCA5Q8WWZ7 1642 aa34.93■■■■□ 3.18
CCDC7-201ENST00000277657 ERCC6Q03468 1493 aa34.92■■■■□ 3.18
CCDC7-201ENST00000277657 CLIP1P30622 1438 aa34.89■■■■□ 3.18
CCDC7-201ENST00000277657 CUL7Q14999 1698 aa34.84■■■■□ 3.17
CCDC7-201ENST00000277657 TDRD9Q8NDG6 1382 aaKnown RBP34.83■■■■□ 3.17
CCDC7-201ENST00000277657 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
CCDC7-201ENST00000277657 GAPVD1Q14C86 1478 aa34.82■■■■□ 3.16
CCDC7-201ENST00000277657 IFT140Q96RY7 1462 aa34.74■■■■□ 3.15
CCDC7-201ENST00000277657 PCGF6Q9BYE7 350 aa34.69■■■■□ 3.14
CCDC7-201ENST00000277657 TRIM26Q12899 539 aaPredicted RBP34.67■■■■□ 3.14
CCDC7-201ENST00000277657 VPS8Q8N3P4 1428 aa34.62■■■■□ 3.13
CCDC7-201ENST00000277657 PBRM1Q86U86 1689 aa34.61■■■■□ 3.13
CCDC7-201ENST00000277657 AQRO60306 1485 aaKnown RBP eCLIP34.59■■■■□ 3.13
CCDC7-201ENST00000277657 RANGAP1P46060 587 aaPredicted RBP34.58■■■■□ 3.13
CCDC7-201ENST00000277657 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
CCDC7-201ENST00000277657 ZNF608Q9ULD9 1512 aaPredicted RBP34.55■■■■□ 3.12
CCDC7-201ENST00000277657 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
CCDC7-201ENST00000277657 ARHGAP35Q9NRY4 1499 aa34.52■■■■□ 3.12
CCDC7-201ENST00000277657 CTTNBP2Q8WZ74 1663 aa34.47■■■■□ 3.11
CCDC7-201ENST00000277657 FHAD1B1AJZ9 1412 aa34.45■■■■□ 3.11
CCDC7-201ENST00000277657 ADAMTS12P58397 1594 aa34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms