Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MRPL35Q9NZE8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.26■□□□□ 0.67
MRPL35Q9NZE8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MRPL35Q9NZE8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL35Q9NZE8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MRPL35Q9NZE8 AC120057.4-201ENST00000624722 1615 ntBASIC19.25■□□□□ 0.67
MRPL35Q9NZE8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL35Q9NZE8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL35Q9NZE8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL35Q9NZE8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL35Q9NZE8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL35Q9NZE8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL35Q9NZE8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL35Q9NZE8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL35Q9NZE8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL35Q9NZE8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL35Q9NZE8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.21■□□□□ 0.67
MRPL35Q9NZE8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL35Q9NZE8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL35Q9NZE8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL35Q9NZE8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL35Q9NZE8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MRPL35Q9NZE8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL35Q9NZE8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
MRPL35Q9NZE8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL35Q9NZE8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MRPL35Q9NZE8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL35Q9NZE8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
MRPL35Q9NZE8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MRPL35Q9NZE8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL35Q9NZE8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL35Q9NZE8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.12■□□□□ 0.65
MRPL35Q9NZE8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL35Q9NZE8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL35Q9NZE8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL35Q9NZE8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.1■□□□□ 0.65
MRPL35Q9NZE8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.1■□□□□ 0.65
MRPL35Q9NZE8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL35Q9NZE8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MRPL35Q9NZE8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
MRPL35Q9NZE8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MRPL35Q9NZE8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MRPL35Q9NZE8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.08■□□□□ 0.64
MRPL35Q9NZE8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
MRPL35Q9NZE8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL35Q9NZE8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MRPL35Q9NZE8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.07■□□□□ 0.64
MRPL35Q9NZE8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MRPL35Q9NZE8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.06■□□□□ 0.64
MRPL35Q9NZE8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.06■□□□□ 0.64
MRPL35Q9NZE8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MRPL35Q9NZE8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.04■□□□□ 0.64
MRPL35Q9NZE8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MRPL35Q9NZE8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MRPL35Q9NZE8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL35Q9NZE8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL35Q9NZE8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL35Q9NZE8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MRPL35Q9NZE8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.01■□□□□ 0.63
MRPL35Q9NZE8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL35Q9NZE8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MRPL35Q9NZE8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MRPL35Q9NZE8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19■□□□□ 0.63
MRPL35Q9NZE8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL35Q9NZE8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL35Q9NZE8 AC015813.7-201ENST00000623294 581 ntBASIC18.99■□□□□ 0.63
MRPL35Q9NZE8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MRPL35Q9NZE8 AC142086.6-201ENST00000621154 1765 ntBASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MRPL35Q9NZE8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPL35Q9NZE8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.97■□□□□ 0.63
MRPL35Q9NZE8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPL35Q9NZE8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MRPL35Q9NZE8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MRPL35Q9NZE8 ST7-AS1-201ENST00000456775 1889 ntBASIC18.96■□□□□ 0.63
MRPL35Q9NZE8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 AC135731.1-201ENST00000569415 2548 ntBASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MRPL35Q9NZE8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MRPL35Q9NZE8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms