Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.99■■■□□ 2.71
ZFYVE28Q9HCC9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ZFYVE28Q9HCC9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
ZFYVE28Q9HCC9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ZFYVE28Q9HCC9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.96■■■□□ 2.71
ZFYVE28Q9HCC9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ZFYVE28Q9HCC9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.95■■■□□ 2.7
ZFYVE28Q9HCC9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.94■■■□□ 2.7
ZFYVE28Q9HCC9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ZFYVE28Q9HCC9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.92■■■□□ 2.7
ZFYVE28Q9HCC9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.92■■■□□ 2.7
ZFYVE28Q9HCC9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ZFYVE28Q9HCC9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ZFYVE28Q9HCC9 DUX4L29-201ENST00000425409 679 ntBASIC31.9■■■□□ 2.7
ZFYVE28Q9HCC9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ZFYVE28Q9HCC9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.9■■■□□ 2.7
ZFYVE28Q9HCC9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.9■■■□□ 2.7
ZFYVE28Q9HCC9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
ZFYVE28Q9HCC9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.88■■■□□ 2.69
ZFYVE28Q9HCC9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ZFYVE28Q9HCC9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ZFYVE28Q9HCC9 MIR4449-201ENST00000578365 66 ntBASIC31.87■■■□□ 2.69
ZFYVE28Q9HCC9 WASH5P-204ENST00000632292 975 ntBASIC31.87■■■□□ 2.69
ZFYVE28Q9HCC9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ZFYVE28Q9HCC9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
ZFYVE28Q9HCC9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZFYVE28Q9HCC9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ZFYVE28Q9HCC9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ZFYVE28Q9HCC9 MIR639-201ENST00000384974 98 ntBASIC31.79■■■□□ 2.68
ZFYVE28Q9HCC9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.77■■■□□ 2.68
ZFYVE28Q9HCC9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
ZFYVE28Q9HCC9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ZFYVE28Q9HCC9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ZFYVE28Q9HCC9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.74■■■□□ 2.67
ZFYVE28Q9HCC9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
ZFYVE28Q9HCC9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.71■■■□□ 2.67
ZFYVE28Q9HCC9 AC021231.2-201ENST00000594613 730 ntBASIC31.71■■■□□ 2.67
ZFYVE28Q9HCC9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ZFYVE28Q9HCC9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
ZFYVE28Q9HCC9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ZFYVE28Q9HCC9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.67■■■□□ 2.66
ZFYVE28Q9HCC9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ZFYVE28Q9HCC9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ZFYVE28Q9HCC9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.67■■■□□ 2.66
ZFYVE28Q9HCC9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZFYVE28Q9HCC9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ZFYVE28Q9HCC9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ZFYVE28Q9HCC9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ZFYVE28Q9HCC9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.63■■■□□ 2.65
ZFYVE28Q9HCC9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.63■■■□□ 2.65
ZFYVE28Q9HCC9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZFYVE28Q9HCC9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZFYVE28Q9HCC9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.62■■■□□ 2.65
ZFYVE28Q9HCC9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.62■■■□□ 2.65
ZFYVE28Q9HCC9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZFYVE28Q9HCC9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZFYVE28Q9HCC9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.6■■■□□ 2.65
ZFYVE28Q9HCC9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
ZFYVE28Q9HCC9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.59■■■□□ 2.65
ZFYVE28Q9HCC9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ZFYVE28Q9HCC9 MIR3648-2-201ENST00000581792 180 ntBASIC31.58■■■□□ 2.65
ZFYVE28Q9HCC9 MIR3648-1-201ENST00000615959 180 ntBASIC31.58■■■□□ 2.65
ZFYVE28Q9HCC9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
ZFYVE28Q9HCC9 AC016575.1-201ENST00000607026 382 ntBASIC31.57■■■□□ 2.64
ZFYVE28Q9HCC9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZFYVE28Q9HCC9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZFYVE28Q9HCC9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.56■■■□□ 2.64
ZFYVE28Q9HCC9 HSD17B1P1-201ENST00000590052 955 ntBASIC31.55■■■□□ 2.64
ZFYVE28Q9HCC9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
ZFYVE28Q9HCC9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZFYVE28Q9HCC9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
ZFYVE28Q9HCC9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.51■■■□□ 2.63
ZFYVE28Q9HCC9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.5■■■□□ 2.63
ZFYVE28Q9HCC9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZFYVE28Q9HCC9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.49■■■□□ 2.63
ZFYVE28Q9HCC9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZFYVE28Q9HCC9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.48■■■□□ 2.63
ZFYVE28Q9HCC9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ZFYVE28Q9HCC9 AC108673.1-201ENST00000510422 1159 ntBASIC31.47■■■□□ 2.63
ZFYVE28Q9HCC9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.47■■■□□ 2.63
ZFYVE28Q9HCC9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.45■■■□□ 2.63
ZFYVE28Q9HCC9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
ZFYVE28Q9HCC9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
ZFYVE28Q9HCC9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.45■■■□□ 2.63
ZFYVE28Q9HCC9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
ZFYVE28Q9HCC9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.44■■■□□ 2.62
ZFYVE28Q9HCC9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.44■■■□□ 2.62
ZFYVE28Q9HCC9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
ZFYVE28Q9HCC9 MIR6090-201ENST00000622481 60 ntBASIC31.42■■■□□ 2.62
ZFYVE28Q9HCC9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.41■■■□□ 2.62
ZFYVE28Q9HCC9 DUX4L11-201ENST00000611504 1267 ntBASIC31.41■■■□□ 2.62
ZFYVE28Q9HCC9 DUX4L12-201ENST00000614593 1267 ntBASIC31.41■■■□□ 2.62
ZFYVE28Q9HCC9 DUX4L14-201ENST00000621227 1267 ntBASIC31.41■■■□□ 2.62
ZFYVE28Q9HCC9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ZFYVE28Q9HCC9 LINC01971-201ENST00000617888 1048 ntBASIC31.39■■■□□ 2.62
ZFYVE28Q9HCC9 CR559946.2-201ENST00000623684 991 ntBASIC31.38■■■□□ 2.61
ZFYVE28Q9HCC9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ZFYVE28Q9HCC9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZFYVE28Q9HCC9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZFYVE28Q9HCC9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms