Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GSX1Q9H4S2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
GSX1Q9H4S2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
GSX1Q9H4S2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
GSX1Q9H4S2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GSX1Q9H4S2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GSX1Q9H4S2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
GSX1Q9H4S2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.08■■□□□ 1.29
GSX1Q9H4S2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.08■■□□□ 1.29
GSX1Q9H4S2 MIR639-201ENST00000384974 98 ntBASIC23.07■■□□□ 1.28
GSX1Q9H4S2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
GSX1Q9H4S2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
GSX1Q9H4S2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GSX1Q9H4S2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.03■■□□□ 1.28
GSX1Q9H4S2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
GSX1Q9H4S2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GSX1Q9H4S2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.99■■□□□ 1.27
GSX1Q9H4S2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.98■■□□□ 1.27
GSX1Q9H4S2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.98■■□□□ 1.27
GSX1Q9H4S2 DUX4L29-201ENST00000425409 679 ntBASIC22.97■■□□□ 1.27
GSX1Q9H4S2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.97■■□□□ 1.27
GSX1Q9H4S2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.97■■□□□ 1.27
GSX1Q9H4S2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GSX1Q9H4S2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.95■■□□□ 1.26
GSX1Q9H4S2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
GSX1Q9H4S2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.94■■□□□ 1.26
GSX1Q9H4S2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GSX1Q9H4S2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GSX1Q9H4S2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
GSX1Q9H4S2 AC016575.1-201ENST00000607026 382 ntBASIC22.9■■□□□ 1.26
GSX1Q9H4S2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.89■■□□□ 1.25
GSX1Q9H4S2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
GSX1Q9H4S2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.87■■□□□ 1.25
GSX1Q9H4S2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GSX1Q9H4S2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
GSX1Q9H4S2 MIR3648-2-201ENST00000581792 180 ntBASIC22.85■■□□□ 1.25
GSX1Q9H4S2 MIR3648-1-201ENST00000615959 180 ntBASIC22.85■■□□□ 1.25
GSX1Q9H4S2 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.84■■□□□ 1.25
GSX1Q9H4S2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 AC021231.2-201ENST00000594613 730 ntBASIC22.84■■□□□ 1.25
GSX1Q9H4S2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
GSX1Q9H4S2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
GSX1Q9H4S2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.83■■□□□ 1.25
GSX1Q9H4S2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
GSX1Q9H4S2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
GSX1Q9H4S2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.76■■□□□ 1.23
GSX1Q9H4S2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.74■■□□□ 1.23
GSX1Q9H4S2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
GSX1Q9H4S2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.72■■□□□ 1.23
GSX1Q9H4S2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.72■■□□□ 1.23
GSX1Q9H4S2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
GSX1Q9H4S2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.7■■□□□ 1.22
GSX1Q9H4S2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.7■■□□□ 1.22
GSX1Q9H4S2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
GSX1Q9H4S2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 CR559946.2-201ENST00000623684 991 ntBASIC22.68■■□□□ 1.22
GSX1Q9H4S2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
GSX1Q9H4S2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
GSX1Q9H4S2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.67■■□□□ 1.22
GSX1Q9H4S2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
GSX1Q9H4S2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
GSX1Q9H4S2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
GSX1Q9H4S2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
GSX1Q9H4S2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L11-201ENST00000611504 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L12-201ENST00000614593 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 DUX4L14-201ENST00000621227 1267 ntBASIC22.63■■□□□ 1.21
GSX1Q9H4S2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.63■■□□□ 1.21
GSX1Q9H4S2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms