Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
TTC16Q8NEE8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TTC16Q8NEE8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TTC16Q8NEE8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
TTC16Q8NEE8 MIR3665-201ENST00000578708 105 ntBASIC28.42■■■□□ 2.14
TTC16Q8NEE8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC16Q8NEE8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC16Q8NEE8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TTC16Q8NEE8 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.39■■■□□ 2.14
TTC16Q8NEE8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC16Q8NEE8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC16Q8NEE8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.37■■■□□ 2.13
TTC16Q8NEE8 AC005559.1-201ENST00000589661 871 ntBASIC28.37■■■□□ 2.13
TTC16Q8NEE8 DUX4L28-201ENST00000623687 678 ntBASIC28.37■■■□□ 2.13
TTC16Q8NEE8 WASH5P-204ENST00000632292 975 ntBASIC28.37■■■□□ 2.13
TTC16Q8NEE8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.36■■■□□ 2.13
TTC16Q8NEE8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
TTC16Q8NEE8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.35■■■□□ 2.13
TTC16Q8NEE8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
TTC16Q8NEE8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
TTC16Q8NEE8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.34■■■□□ 2.13
TTC16Q8NEE8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TTC16Q8NEE8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TTC16Q8NEE8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
TTC16Q8NEE8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC16Q8NEE8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.3■■■□□ 2.12
TTC16Q8NEE8 AC087741.3-201ENST00000624270 1347 ntBASIC28.29■■■□□ 2.12
TTC16Q8NEE8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.29■■■□□ 2.12
TTC16Q8NEE8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.29■■■□□ 2.12
TTC16Q8NEE8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.28■■■□□ 2.12
TTC16Q8NEE8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC16Q8NEE8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
TTC16Q8NEE8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.25■■■□□ 2.11
TTC16Q8NEE8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
TTC16Q8NEE8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
TTC16Q8NEE8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TTC16Q8NEE8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.23■■■□□ 2.11
TTC16Q8NEE8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.23■■■□□ 2.11
TTC16Q8NEE8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.23■■■□□ 2.11
TTC16Q8NEE8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TTC16Q8NEE8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TTC16Q8NEE8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TTC16Q8NEE8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TTC16Q8NEE8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
TTC16Q8NEE8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
TTC16Q8NEE8 AC044849.2-201ENST00000606596 710 ntBASIC28.2■■■□□ 2.1
TTC16Q8NEE8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TTC16Q8NEE8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC16Q8NEE8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC16Q8NEE8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TTC16Q8NEE8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC16Q8NEE8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC28.16■■■□□ 2.1
TTC16Q8NEE8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TTC16Q8NEE8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC16Q8NEE8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.14■■■□□ 2.1
TTC16Q8NEE8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC16Q8NEE8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.12■■■□□ 2.09
TTC16Q8NEE8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TTC16Q8NEE8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC16Q8NEE8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TTC16Q8NEE8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TTC16Q8NEE8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TTC16Q8NEE8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC16Q8NEE8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC16Q8NEE8 ABHD17AP4-201ENST00000411545 909 ntBASIC28.1■■■□□ 2.09
TTC16Q8NEE8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.09■■■□□ 2.09
TTC16Q8NEE8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TTC16Q8NEE8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TTC16Q8NEE8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC16Q8NEE8 MIR7108-201ENST00000614319 87 ntBASIC28.06■■■□□ 2.08
TTC16Q8NEE8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.05■■■□□ 2.08
TTC16Q8NEE8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TTC16Q8NEE8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TTC16Q8NEE8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TTC16Q8NEE8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TTC16Q8NEE8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.04■■■□□ 2.08
TTC16Q8NEE8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TTC16Q8NEE8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TTC16Q8NEE8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
TTC16Q8NEE8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
TTC16Q8NEE8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.03■■■□□ 2.08
TTC16Q8NEE8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TTC16Q8NEE8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.02■■■□□ 2.08
TTC16Q8NEE8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TTC16Q8NEE8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
TTC16Q8NEE8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC16Q8NEE8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
TTC16Q8NEE8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
TTC16Q8NEE8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TTC16Q8NEE8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TTC16Q8NEE8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.99■■■□□ 2.07
TTC16Q8NEE8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TTC16Q8NEE8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
TTC16Q8NEE8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.97■■■□□ 2.07
TTC16Q8NEE8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.97■■■□□ 2.07
TTC16Q8NEE8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.97■■■□□ 2.07
TTC16Q8NEE8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TTC16Q8NEE8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TTC16Q8NEE8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.95■■■□□ 2.06
TTC16Q8NEE8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms