Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.88■■□□□ 1.25
FAM90A1Q86YD7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
FAM90A1Q86YD7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.84■■□□□ 1.25
FAM90A1Q86YD7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FAM90A1Q86YD7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
FAM90A1Q86YD7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.84■■□□□ 1.25
FAM90A1Q86YD7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
FAM90A1Q86YD7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
FAM90A1Q86YD7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
FAM90A1Q86YD7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.83■■□□□ 1.25
FAM90A1Q86YD7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.24
FAM90A1Q86YD7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
FAM90A1Q86YD7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.8■■□□□ 1.24
FAM90A1Q86YD7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
FAM90A1Q86YD7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
FAM90A1Q86YD7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
FAM90A1Q86YD7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.79■■□□□ 1.24
FAM90A1Q86YD7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
FAM90A1Q86YD7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
FAM90A1Q86YD7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.78■■□□□ 1.24
FAM90A1Q86YD7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
FAM90A1Q86YD7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
FAM90A1Q86YD7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
FAM90A1Q86YD7 CAHM-201ENST00000604200 896 ntBASIC22.75■■□□□ 1.23
FAM90A1Q86YD7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.75■■□□□ 1.23
FAM90A1Q86YD7 WASH5P-204ENST00000632292 975 ntBASIC22.75■■□□□ 1.23
FAM90A1Q86YD7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
FAM90A1Q86YD7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.74■■□□□ 1.23
FAM90A1Q86YD7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
FAM90A1Q86YD7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A1Q86YD7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A1Q86YD7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
FAM90A1Q86YD7 AL391121.1-201ENST00000607967 1349 ntBASIC22.73■■□□□ 1.23
FAM90A1Q86YD7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
FAM90A1Q86YD7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM90A1Q86YD7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.7■■□□□ 1.22
FAM90A1Q86YD7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FAM90A1Q86YD7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM90A1Q86YD7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM90A1Q86YD7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM90A1Q86YD7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
FAM90A1Q86YD7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A1Q86YD7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.67■■□□□ 1.22
FAM90A1Q86YD7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
FAM90A1Q86YD7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FAM90A1Q86YD7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM90A1Q86YD7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.66■■□□□ 1.22
FAM90A1Q86YD7 SUZ12P1-203ENST00000578195 985 ntBASIC22.66■■□□□ 1.22
FAM90A1Q86YD7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM90A1Q86YD7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.65■■□□□ 1.22
FAM90A1Q86YD7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A1Q86YD7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A1Q86YD7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM90A1Q86YD7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FAM90A1Q86YD7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FAM90A1Q86YD7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.62■■□□□ 1.21
FAM90A1Q86YD7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
FAM90A1Q86YD7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
FAM90A1Q86YD7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.61■■□□□ 1.21
FAM90A1Q86YD7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
FAM90A1Q86YD7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
FAM90A1Q86YD7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FAM90A1Q86YD7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
FAM90A1Q86YD7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.59■■□□□ 1.21
FAM90A1Q86YD7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
FAM90A1Q86YD7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.58■■□□□ 1.21
FAM90A1Q86YD7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.57■■□□□ 1.2
FAM90A1Q86YD7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A1Q86YD7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FAM90A1Q86YD7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM90A1Q86YD7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A1Q86YD7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM90A1Q86YD7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
FAM90A1Q86YD7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
FAM90A1Q86YD7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM90A1Q86YD7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.53■■□□□ 1.2
FAM90A1Q86YD7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.53■■□□□ 1.2
FAM90A1Q86YD7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A1Q86YD7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.53■■□□□ 1.2
FAM90A1Q86YD7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM90A1Q86YD7 AL161658.1-201ENST00000623641 1967 ntBASIC22.52■■□□□ 1.2
FAM90A1Q86YD7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.52■■□□□ 1.2
FAM90A1Q86YD7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM90A1Q86YD7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FAM90A1Q86YD7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM90A1Q86YD7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM90A1Q86YD7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A1Q86YD7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM90A1Q86YD7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM90A1Q86YD7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A1Q86YD7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A1Q86YD7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM90A1Q86YD7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM90A1Q86YD7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
FAM90A1Q86YD7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms