Protein–RNA interactions for Protein: Q86US8

SMG6, Telomerase-binding protein EST1A, humanhuman

Known RBP Predictions only

Length 1,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6Q86US8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
SMG6Q86US8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC37.2■■■■□ 3.55
SMG6Q86US8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
SMG6Q86US8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
SMG6Q86US8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC37.2■■■■□ 3.55
SMG6Q86US8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC37.2■■■■□ 3.55
SMG6Q86US8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
SMG6Q86US8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC37.18■■■■□ 3.54
SMG6Q86US8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
SMG6Q86US8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
SMG6Q86US8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC37.16■■■■□ 3.54
SMG6Q86US8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
SMG6Q86US8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
SMG6Q86US8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC37.13■■■■□ 3.53
SMG6Q86US8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
SMG6Q86US8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
SMG6Q86US8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
SMG6Q86US8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC37.11■■■■□ 3.53
SMG6Q86US8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC37.1■■■■□ 3.53
SMG6Q86US8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
SMG6Q86US8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC37.09■■■■□ 3.53
SMG6Q86US8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
SMG6Q86US8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
SMG6Q86US8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
SMG6Q86US8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
SMG6Q86US8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC37.08■■■■□ 3.53
SMG6Q86US8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
SMG6Q86US8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC37.06■■■■□ 3.52
SMG6Q86US8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC37.06■■■■□ 3.52
SMG6Q86US8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC37.05■■■■□ 3.52
SMG6Q86US8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC37.05■■■■□ 3.52
SMG6Q86US8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC37.04■■■■□ 3.52
SMG6Q86US8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
SMG6Q86US8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
SMG6Q86US8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC37.01■■■■□ 3.51
SMG6Q86US8 MIR3665-201ENST00000578708 105 ntBASIC37.01■■■■□ 3.51
SMG6Q86US8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.98■■■■□ 3.51
SMG6Q86US8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SMG6Q86US8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC36.97■■■■□ 3.51
SMG6Q86US8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SMG6Q86US8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
SMG6Q86US8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SMG6Q86US8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC36.92■■■■□ 3.5
SMG6Q86US8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC36.91■■■■□ 3.5
SMG6Q86US8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC36.91■■■■□ 3.5
SMG6Q86US8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC36.91■■■■□ 3.5
SMG6Q86US8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
SMG6Q86US8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC36.9■■■■□ 3.5
SMG6Q86US8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC36.9■■■■□ 3.5
SMG6Q86US8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
SMG6Q86US8 DUX4L28-201ENST00000623687 678 ntBASIC36.9■■■■□ 3.5
SMG6Q86US8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SMG6Q86US8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SMG6Q86US8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
SMG6Q86US8 WASH5P-204ENST00000632292 975 ntBASIC36.88■■■■□ 3.49
SMG6Q86US8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
SMG6Q86US8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC36.87■■■■□ 3.49
SMG6Q86US8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.87■■■■□ 3.49
SMG6Q86US8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC36.87■■■■□ 3.49
SMG6Q86US8 CHML-205ENST00000638160 705 ntTSL 3 BASIC36.87■■■■□ 3.49
SMG6Q86US8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC36.87■■■■□ 3.49
SMG6Q86US8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
SMG6Q86US8 MIR762-201ENST00000390236 83 ntBASIC36.86■■■■□ 3.49
SMG6Q86US8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
SMG6Q86US8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
SMG6Q86US8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
SMG6Q86US8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC36.84■■■■□ 3.49
SMG6Q86US8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
SMG6Q86US8 AC087741.3-201ENST00000624270 1347 ntBASIC36.82■■■■□ 3.49
SMG6Q86US8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC36.81■■■■□ 3.48
SMG6Q86US8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
SMG6Q86US8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC36.81■■■■□ 3.48
SMG6Q86US8 AC005559.1-201ENST00000589661 871 ntBASIC36.81■■■■□ 3.48
SMG6Q86US8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
SMG6Q86US8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
SMG6Q86US8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC36.77■■■■□ 3.48
SMG6Q86US8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
SMG6Q86US8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
SMG6Q86US8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.48
SMG6Q86US8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC36.76■■■■□ 3.47
SMG6Q86US8 AC044849.2-201ENST00000606596 710 ntBASIC36.76■■■■□ 3.47
SMG6Q86US8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.73■■■■□ 3.47
SMG6Q86US8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
SMG6Q86US8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
SMG6Q86US8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
SMG6Q86US8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.46
SMG6Q86US8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC36.67■■■■□ 3.46
SMG6Q86US8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC36.67■■■■□ 3.46
SMG6Q86US8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
SMG6Q86US8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
SMG6Q86US8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
SMG6Q86US8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.65■■■■□ 3.46
SMG6Q86US8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
SMG6Q86US8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC36.64■■■■□ 3.46
SMG6Q86US8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC36.63■■■■□ 3.45
SMG6Q86US8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
SMG6Q86US8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.62■■■■□ 3.45
SMG6Q86US8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.61■■■■□ 3.45
SMG6Q86US8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
SMG6Q86US8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC36.6■■■■□ 3.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms