Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDH17O14917 SUZ12P1-203ENST00000578195 985 ntBASIC25.87■■□□□ 1.73
PCDH17O14917 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDH17O14917 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.85■■□□□ 1.73
PCDH17O14917 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH17O14917 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDH17O14917 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
PCDH17O14917 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH17O14917 AL391121.1-201ENST00000607967 1349 ntBASIC25.82■■□□□ 1.72
PCDH17O14917 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDH17O14917 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH17O14917 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH17O14917 CAHM-201ENST00000604200 896 ntBASIC25.8■■□□□ 1.72
PCDH17O14917 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
PCDH17O14917 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH17O14917 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH17O14917 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH17O14917 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.77■■□□□ 1.72
PCDH17O14917 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
PCDH17O14917 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH17O14917 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH17O14917 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH17O14917 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH17O14917 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH17O14917 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH17O14917 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
PCDH17O14917 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.72■■□□□ 1.71
PCDH17O14917 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH17O14917 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH17O14917 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH17O14917 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDH17O14917 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDH17O14917 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH17O14917 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDH17O14917 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH17O14917 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH17O14917 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH17O14917 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
PCDH17O14917 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH17O14917 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH17O14917 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
PCDH17O14917 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDH17O14917 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDH17O14917 AP006261.1-201ENST00000584783 668 ntBASIC25.64■■□□□ 1.7
PCDH17O14917 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH17O14917 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH17O14917 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH17O14917 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH17O14917 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH17O14917 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH17O14917 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH17O14917 RPS2P35-201ENST00000443417 897 ntBASIC25.6■■□□□ 1.69
PCDH17O14917 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH17O14917 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH17O14917 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDH17O14917 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.58■■□□□ 1.69
PCDH17O14917 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH17O14917 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDH17O14917 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH17O14917 WASH5P-204ENST00000632292 975 ntBASIC25.56■■□□□ 1.68
PCDH17O14917 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDH17O14917 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH17O14917 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH17O14917 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDH17O14917 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH17O14917 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH17O14917 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.49■■□□□ 1.67
PCDH17O14917 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH17O14917 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.49■■□□□ 1.67
PCDH17O14917 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH17O14917 MIR3665-201ENST00000578708 105 ntBASIC25.47■■□□□ 1.67
PCDH17O14917 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDH17O14917 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH17O14917 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDH17O14917 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH17O14917 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDH17O14917 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH17O14917 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDH17O14917 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH17O14917 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH17O14917 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
PCDH17O14917 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDH17O14917 AL162393.1-201ENST00000437852 946 ntBASIC25.42■■□□□ 1.66
PCDH17O14917 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH17O14917 AC120057.4-201ENST00000624722 1615 ntBASIC25.41■■□□□ 1.66
PCDH17O14917 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDH17O14917 MIR762-201ENST00000390236 83 ntBASIC25.4■■□□□ 1.66
PCDH17O14917 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH17O14917 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH17O14917 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDH17O14917 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDH17O14917 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
PCDH17O14917 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH17O14917 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.38■■□□□ 1.65
PCDH17O14917 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH17O14917 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDH17O14917 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH17O14917 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDH17O14917 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.37■■□□□ 1.65
PCDH17O14917 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms