Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC39.24■■■■□ 3.87
CHD2O14647 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.22■■■■□ 3.87
CHD2O14647 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.22■■■■□ 3.87
CHD2O14647 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.21■■■■□ 3.87
CHD2O14647 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.19■■■■□ 3.86
CHD2O14647 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC39.19■■■■□ 3.86
CHD2O14647 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
CHD2O14647 MIR4449-201ENST00000578365 66 ntBASIC39.16■■■■□ 3.86
CHD2O14647 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
CHD2O14647 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
CHD2O14647 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.15■■■■□ 3.86
CHD2O14647 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.15■■■■□ 3.86
CHD2O14647 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.14■■■■□ 3.86
CHD2O14647 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
CHD2O14647 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
CHD2O14647 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.12■■■■□ 3.85
CHD2O14647 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
CHD2O14647 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
CHD2O14647 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
CHD2O14647 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.05■■■■□ 3.84
CHD2O14647 WASH5P-204ENST00000632292 975 ntBASIC39.05■■■■□ 3.84
CHD2O14647 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.03■■■■□ 3.84
CHD2O14647 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.03■■■■□ 3.84
CHD2O14647 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.02■■■■□ 3.84
CHD2O14647 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC39.01■■■■□ 3.84
CHD2O14647 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
CHD2O14647 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.99■■■■□ 3.83
CHD2O14647 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
CHD2O14647 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD2O14647 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
CHD2O14647 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC38.97■■■■□ 3.83
CHD2O14647 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
CHD2O14647 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
CHD2O14647 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC38.94■■■■□ 3.82
CHD2O14647 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC38.93■■■■□ 3.82
CHD2O14647 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC38.92■■■■□ 3.82
CHD2O14647 DUX4L29-201ENST00000425409 679 ntBASIC38.92■■■■□ 3.82
CHD2O14647 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC38.91■■■■□ 3.82
CHD2O14647 MIR639-201ENST00000384974 98 ntBASIC38.91■■■■□ 3.82
CHD2O14647 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
CHD2O14647 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
CHD2O14647 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
CHD2O14647 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC38.9■■■■□ 3.82
CHD2O14647 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CHD2O14647 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
CHD2O14647 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
CHD2O14647 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CHD2O14647 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
CHD2O14647 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CHD2O14647 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.78■■■■□ 3.8
CHD2O14647 HSD17B1P1-201ENST00000590052 955 ntBASIC38.77■■■■□ 3.8
CHD2O14647 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
CHD2O14647 AC021231.2-201ENST00000594613 730 ntBASIC38.77■■■■□ 3.8
CHD2O14647 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
CHD2O14647 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC38.76■■■■□ 3.8
CHD2O14647 AC016575.1-201ENST00000607026 382 ntBASIC38.76■■■■□ 3.8
CHD2O14647 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC38.75■■■■□ 3.79
CHD2O14647 MIR3648-2-201ENST00000581792 180 ntBASIC38.75■■■■□ 3.79
CHD2O14647 MIR3648-1-201ENST00000615959 180 ntBASIC38.75■■■■□ 3.79
CHD2O14647 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
CHD2O14647 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
CHD2O14647 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CHD2O14647 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.73■■■■□ 3.79
CHD2O14647 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC38.71■■■■□ 3.79
CHD2O14647 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC38.7■■■■□ 3.79
CHD2O14647 CR559946.2-201ENST00000623684 991 ntBASIC38.7■■■■□ 3.79
CHD2O14647 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CHD2O14647 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC38.69■■■■□ 3.78
CHD2O14647 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC38.69■■■■□ 3.78
CHD2O14647 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CHD2O14647 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.68■■■■□ 3.78
CHD2O14647 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CHD2O14647 CALM3-209ENST00000597743 577 ntTSL 4 BASIC38.67■■■■□ 3.78
CHD2O14647 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC38.65■■■■□ 3.78
CHD2O14647 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
CHD2O14647 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC38.62■■■■□ 3.77
CHD2O14647 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC38.61■■■■□ 3.77
CHD2O14647 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CHD2O14647 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC38.61■■■■□ 3.77
CHD2O14647 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
CHD2O14647 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC38.59■■■■□ 3.77
CHD2O14647 BRD4-212ENST00000630599 726 ntTSL 2 BASIC38.59■■■■□ 3.77
CHD2O14647 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
CHD2O14647 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC38.56■■■■□ 3.76
CHD2O14647 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC38.56■■■■□ 3.76
CHD2O14647 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC38.55■■■■□ 3.76
CHD2O14647 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
CHD2O14647 AGPS-202ENST00000409888 815 ntTSL 4 BASIC38.54■■■■□ 3.76
CHD2O14647 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.54■■■■□ 3.76
CHD2O14647 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.53■■■■□ 3.76
CHD2O14647 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
CHD2O14647 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC38.52■■■■□ 3.76
CHD2O14647 CIB2-204ENST00000557846 934 ntTSL 3 BASIC38.52■■■■□ 3.76
CHD2O14647 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
CHD2O14647 AC108673.1-201ENST00000510422 1159 ntBASIC38.5■■■■□ 3.75
CHD2O14647 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.49■■■■□ 3.75
CHD2O14647 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC38.49■■■■□ 3.75
CHD2O14647 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
CHD2O14647 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC38.49■■■■□ 3.75
CHD2O14647 MIR6090-201ENST00000622481 60 ntBASIC38.47■■■■□ 3.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms