Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL133380.1-201ENST00000506013 324 ntBASIC25.92■■□□□ 1.74
RTCAO00442 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTCAO00442 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTCAO00442 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RTCAO00442 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCAO00442 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTCAO00442 SETD8P1-201ENST00000623146 1180 ntBASIC25.9■■□□□ 1.74
RTCAO00442 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTCAO00442 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTCAO00442 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTCAO00442 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.87■■□□□ 1.73
RTCAO00442 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.87■■□□□ 1.73
RTCAO00442 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.86■■□□□ 1.73
RTCAO00442 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTCAO00442 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RTCAO00442 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTCAO00442 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTCAO00442 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.8■■□□□ 1.72
RTCAO00442 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCAO00442 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RTCAO00442 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RTCAO00442 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCAO00442 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RTCAO00442 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
RTCAO00442 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RTCAO00442 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.74■■□□□ 1.71
RTCAO00442 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
RTCAO00442 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.74■■□□□ 1.71
RTCAO00442 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
RTCAO00442 WASH5P-204ENST00000632292 975 ntBASIC25.74■■□□□ 1.71
RTCAO00442 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RTCAO00442 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.73■■□□□ 1.71
RTCAO00442 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTCAO00442 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTCAO00442 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTCAO00442 AC136428.2-201ENST00000563187 214 ntBASIC25.71■■□□□ 1.71
RTCAO00442 AL161658.1-201ENST00000623641 1967 ntBASIC25.7■■□□□ 1.7
RTCAO00442 AC097358.2-201ENST00000607541 1159 ntBASIC25.7■■□□□ 1.7
RTCAO00442 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RTCAO00442 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTCAO00442 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTCAO00442 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
RTCAO00442 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RTCAO00442 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.67■■□□□ 1.7
RTCAO00442 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTCAO00442 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.67■■□□□ 1.7
RTCAO00442 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
RTCAO00442 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
RTCAO00442 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.66■■□□□ 1.7
RTCAO00442 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTCAO00442 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RTCAO00442 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.64■■□□□ 1.7
RTCAO00442 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.64■■□□□ 1.7
RTCAO00442 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
RTCAO00442 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RTCAO00442 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RTCAO00442 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RTCAO00442 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTCAO00442 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
RTCAO00442 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
RTCAO00442 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.61■■□□□ 1.69
RTCAO00442 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RTCAO00442 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RTCAO00442 CAHM-201ENST00000604200 896 ntBASIC25.6■■□□□ 1.69
RTCAO00442 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTCAO00442 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTCAO00442 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.59■■□□□ 1.69
RTCAO00442 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTCAO00442 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTCAO00442 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTCAO00442 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCAO00442 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTCAO00442 AL391121.1-201ENST00000607967 1349 ntBASIC25.57■■□□□ 1.68
RTCAO00442 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.56■■□□□ 1.68
RTCAO00442 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTCAO00442 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTCAO00442 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTCAO00442 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
RTCAO00442 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTCAO00442 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTCAO00442 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.52■■□□□ 1.68
RTCAO00442 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTCAO00442 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTCAO00442 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTCAO00442 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCAO00442 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCAO00442 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.49■■□□□ 1.67
RTCAO00442 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTCAO00442 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.48■■□□□ 1.67
RTCAO00442 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTCAO00442 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.48■■□□□ 1.67
RTCAO00442 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCAO00442 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTCAO00442 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.48■■□□□ 1.67
RTCAO00442 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
RTCAO00442 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RTCAO00442 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.47■■□□□ 1.67
RTCAO00442 ABCB10P1-201ENST00000614297 2181 ntBASIC25.46■■□□□ 1.67
RTCAO00442 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.45■■□□□ 1.66
RTCAO00442 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms