Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SIRPB1O00241 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SIRPB1O00241 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SIRPB1O00241 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIRPB1O00241 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SIRPB1O00241 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.86■■□□□ 1.25
SIRPB1O00241 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SIRPB1O00241 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.85■■□□□ 1.25
SIRPB1O00241 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SIRPB1O00241 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SIRPB1O00241 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SIRPB1O00241 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.82■■□□□ 1.24
SIRPB1O00241 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SIRPB1O00241 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.81■■□□□ 1.24
SIRPB1O00241 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.79■■□□□ 1.24
SIRPB1O00241 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
SIRPB1O00241 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SIRPB1O00241 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SIRPB1O00241 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SIRPB1O00241 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIRPB1O00241 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIRPB1O00241 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.76■■□□□ 1.23
SIRPB1O00241 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIRPB1O00241 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.75■■□□□ 1.23
SIRPB1O00241 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SIRPB1O00241 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SIRPB1O00241 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.7■■□□□ 1.22
SIRPB1O00241 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIRPB1O00241 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SIRPB1O00241 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
SIRPB1O00241 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
SIRPB1O00241 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIRPB1O00241 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIRPB1O00241 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIRPB1O00241 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.67■■□□□ 1.22
SIRPB1O00241 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.67■■□□□ 1.22
SIRPB1O00241 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.66■■□□□ 1.22
SIRPB1O00241 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SIRPB1O00241 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
SIRPB1O00241 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SIRPB1O00241 AL161658.1-201ENST00000623641 1967 ntBASIC22.65■■□□□ 1.22
SIRPB1O00241 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.64■■□□□ 1.22
SIRPB1O00241 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SIRPB1O00241 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.63■■□□□ 1.21
SIRPB1O00241 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SIRPB1O00241 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIRPB1O00241 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
SIRPB1O00241 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIRPB1O00241 ABCB10P1-201ENST00000614297 2181 ntBASIC22.6■■□□□ 1.21
SIRPB1O00241 AL133380.1-201ENST00000506013 324 ntBASIC22.6■■□□□ 1.21
SIRPB1O00241 RARRES2P7-201ENST00000567349 469 ntBASIC22.6■■□□□ 1.21
SIRPB1O00241 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIRPB1O00241 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.59■■□□□ 1.21
SIRPB1O00241 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SIRPB1O00241 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SIRPB1O00241 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SIRPB1O00241 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SIRPB1O00241 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIRPB1O00241 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIRPB1O00241 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.56■■□□□ 1.2
SIRPB1O00241 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SIRPB1O00241 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIRPB1O00241 WASH5P-204ENST00000632292 975 ntBASIC22.53■■□□□ 1.2
SIRPB1O00241 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIRPB1O00241 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIRPB1O00241 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIRPB1O00241 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SIRPB1O00241 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.51■■□□□ 1.19
SIRPB1O00241 SETD8P1-201ENST00000623146 1180 ntBASIC22.51■■□□□ 1.19
SIRPB1O00241 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SIRPB1O00241 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SIRPB1O00241 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.51■■□□□ 1.19
SIRPB1O00241 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.51■■□□□ 1.19
SIRPB1O00241 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.5■■□□□ 1.19
SIRPB1O00241 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
SIRPB1O00241 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
SIRPB1O00241 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SIRPB1O00241 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SIRPB1O00241 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SIRPB1O00241 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SIRPB1O00241 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SIRPB1O00241 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIRPB1O00241 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SIRPB1O00241 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SIRPB1O00241 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SIRPB1O00241 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIRPB1O00241 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SIRPB1O00241 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SIRPB1O00241 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.42■■□□□ 1.18
SIRPB1O00241 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SIRPB1O00241 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SIRPB1O00241 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SIRPB1O00241 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SIRPB1O00241 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.39■■□□□ 1.18
SIRPB1O00241 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms