Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SSC5DA1L4H1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.62■■■□□ 2.81
SSC5DA1L4H1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.62■■■□□ 2.81
SSC5DA1L4H1 ZNRF2P2-203ENST00000454624 420 ntBASIC32.61■■■□□ 2.81
SSC5DA1L4H1 WASH5P-204ENST00000632292 975 ntBASIC32.61■■■□□ 2.81
SSC5DA1L4H1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
SSC5DA1L4H1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
SSC5DA1L4H1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SSC5DA1L4H1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.57■■■□□ 2.8
SSC5DA1L4H1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SSC5DA1L4H1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.56■■■□□ 2.8
SSC5DA1L4H1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.55■■■□□ 2.8
SSC5DA1L4H1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
SSC5DA1L4H1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SSC5DA1L4H1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.49■■■□□ 2.79
SSC5DA1L4H1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SSC5DA1L4H1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.46■■■□□ 2.79
SSC5DA1L4H1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.45■■■□□ 2.79
SSC5DA1L4H1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.44■■■□□ 2.78
SSC5DA1L4H1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
SSC5DA1L4H1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SSC5DA1L4H1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
SSC5DA1L4H1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SSC5DA1L4H1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SSC5DA1L4H1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SSC5DA1L4H1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.37■■■□□ 2.77
SSC5DA1L4H1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SSC5DA1L4H1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SSC5DA1L4H1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
SSC5DA1L4H1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SSC5DA1L4H1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
SSC5DA1L4H1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SSC5DA1L4H1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
SSC5DA1L4H1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.31■■■□□ 2.76
SSC5DA1L4H1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SSC5DA1L4H1 DUX4L29-201ENST00000425409 679 ntBASIC32.28■■■□□ 2.76
SSC5DA1L4H1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.28■■■□□ 2.76
SSC5DA1L4H1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SSC5DA1L4H1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SSC5DA1L4H1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
SSC5DA1L4H1 AC021231.2-201ENST00000594613 730 ntBASIC32.25■■■□□ 2.75
SSC5DA1L4H1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SSC5DA1L4H1 MIR4449-201ENST00000578365 66 ntBASIC32.24■■■□□ 2.75
SSC5DA1L4H1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
SSC5DA1L4H1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SSC5DA1L4H1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.19■■■□□ 2.74
SSC5DA1L4H1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.16■■■□□ 2.74
SSC5DA1L4H1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SSC5DA1L4H1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
SSC5DA1L4H1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SSC5DA1L4H1 MIR639-201ENST00000384974 98 ntBASIC32.14■■■□□ 2.74
SSC5DA1L4H1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.13■■■□□ 2.73
SSC5DA1L4H1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.12■■■□□ 2.73
SSC5DA1L4H1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SSC5DA1L4H1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SSC5DA1L4H1 MIR6090-201ENST00000622481 60 ntBASIC32.1■■■□□ 2.73
SSC5DA1L4H1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.07■■■□□ 2.72
SSC5DA1L4H1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSC5DA1L4H1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SSC5DA1L4H1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC32.05■■■□□ 2.72
SSC5DA1L4H1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.05■■■□□ 2.72
SSC5DA1L4H1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SSC5DA1L4H1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SSC5DA1L4H1 AC016575.1-201ENST00000607026 382 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.02■■■□□ 2.72
SSC5DA1L4H1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SSC5DA1L4H1 MIR3648-2-201ENST00000581792 180 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 MIR3648-1-201ENST00000615959 180 ntBASIC32.02■■■□□ 2.72
SSC5DA1L4H1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
SSC5DA1L4H1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SSC5DA1L4H1 CR559946.2-201ENST00000623684 991 ntBASIC32.01■■■□□ 2.71
SSC5DA1L4H1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms