Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV26-1A0A087WT03 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV26-1A0A087WT03 AC097358.2-201ENST00000607541 1159 ntBASIC19.26■□□□□ 0.67
TRAV26-1A0A087WT03 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV26-1A0A087WT03 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV26-1A0A087WT03 AL133380.1-201ENST00000506013 324 ntBASIC19.25■□□□□ 0.67
TRAV26-1A0A087WT03 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV26-1A0A087WT03 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV26-1A0A087WT03 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV26-1A0A087WT03 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV26-1A0A087WT03 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV26-1A0A087WT03 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV26-1A0A087WT03 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV26-1A0A087WT03 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV26-1A0A087WT03 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV26-1A0A087WT03 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV26-1A0A087WT03 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV26-1A0A087WT03 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV26-1A0A087WT03 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV26-1A0A087WT03 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAV26-1A0A087WT03 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV26-1A0A087WT03 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV26-1A0A087WT03 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV26-1A0A087WT03 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV26-1A0A087WT03 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRAV26-1A0A087WT03 AC136428.2-201ENST00000563187 214 ntBASIC19.19■□□□□ 0.66
TRAV26-1A0A087WT03 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV26-1A0A087WT03 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV26-1A0A087WT03 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRAV26-1A0A087WT03 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV26-1A0A087WT03 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV26-1A0A087WT03 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV26-1A0A087WT03 AC120057.4-201ENST00000624722 1615 ntBASIC19.14■□□□□ 0.66
TRAV26-1A0A087WT03 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV26-1A0A087WT03 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV26-1A0A087WT03 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV26-1A0A087WT03 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAV26-1A0A087WT03 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV26-1A0A087WT03 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV26-1A0A087WT03 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV26-1A0A087WT03 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV26-1A0A087WT03 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV26-1A0A087WT03 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV26-1A0A087WT03 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV26-1A0A087WT03 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV26-1A0A087WT03 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV26-1A0A087WT03 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV26-1A0A087WT03 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV26-1A0A087WT03 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV26-1A0A087WT03 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV26-1A0A087WT03 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV26-1A0A087WT03 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV26-1A0A087WT03 AL391121.1-201ENST00000607967 1349 ntBASIC19.05■□□□□ 0.64
TRAV26-1A0A087WT03 CAHM-201ENST00000604200 896 ntBASIC19.05■□□□□ 0.64
TRAV26-1A0A087WT03 WASH5P-204ENST00000632292 975 ntBASIC19.05■□□□□ 0.64
TRAV26-1A0A087WT03 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRAV26-1A0A087WT03 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV26-1A0A087WT03 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV26-1A0A087WT03 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.03■□□□□ 0.64
TRAV26-1A0A087WT03 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV26-1A0A087WT03 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV26-1A0A087WT03 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV26-1A0A087WT03 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV26-1A0A087WT03 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV26-1A0A087WT03 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19■□□□□ 0.63
TRAV26-1A0A087WT03 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV26-1A0A087WT03 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV26-1A0A087WT03 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 SUZ12P1-203ENST00000578195 985 ntBASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV26-1A0A087WT03 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV26-1A0A087WT03 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV26-1A0A087WT03 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV26-1A0A087WT03 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV26-1A0A087WT03 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV26-1A0A087WT03 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV26-1A0A087WT03 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV26-1A0A087WT03 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV26-1A0A087WT03 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV26-1A0A087WT03 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV26-1A0A087WT03 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV26-1A0A087WT03 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV26-1A0A087WT03 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV26-1A0A087WT03 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms