Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.26□□□□□ -0.931e-7■□□□□ 9.3
TROVE2P10155 PCM1-205ENST00000517836 580 ntTSL 33.02□□□□□ -1.931e-7■□□□□ 9.3
TROVE2P10155 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.961e-7■□□□□ 9.3
TROVE2P10155 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.241e-323■□□□□ 9.3
TROVE2P10155 RPS12-202ENST00000484616 639 ntTSL 23.24□□□□□ -1.891e-323■□□□□ 9.3
TROVE2P10155 SNORD100-201ENST00000408573 76 ntBASIC0.11□□□□□ -2.391e-323■□□□□ 9.3
TROVE2P10155 SNRPB-203ENST00000474384 985 ntTSL 516.86■□□□□ 0.291e-323■□□□□ 9.3
TROVE2P10155 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.021e-323■□□□□ 9.3
TROVE2P10155 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.021e-323■□□□□ 9.3
TROVE2P10155 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.8■■□□□ 1.47e-9■□□□□ 9.3
TROVE2P10155 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.157e-9■□□□□ 9.3
TROVE2P10155 SLC22A31-205ENST00000603735 791 ntTSL 316.26■□□□□ 0.197e-9■□□□□ 9.3
TROVE2P10155 SLC22A31-204ENST00000568161 651 ntTSL 313.47□□□□□ -0.257e-9■□□□□ 9.3
TROVE2P10155 ARAP1-210ENST00000465814 5612 ntTSL 216.47■□□□□ 0.231e-14■□□□□ 9.3
TROVE2P10155 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.121e-14■□□□□ 9.3
TROVE2P10155 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.011e-14■□□□□ 9.3
TROVE2P10155 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.041e-14■□□□□ 9.3
TROVE2P10155 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.121e-14■□□□□ 9.3
TROVE2P10155 ARAP1-208ENST00000452383 994 ntTSL 313.11□□□□□ -0.311e-14■□□□□ 9.3
TROVE2P10155 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.551e-14■□□□□ 9.3
TROVE2P10155 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.681e-14■□□□□ 9.3
TROVE2P10155 CTDSP1-207ENST00000473420 922 ntTSL 317.69■□□□□ 0.423e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-215ENST00000498160 877 ntTSL 516.73■□□□□ 0.273e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-214ENST00000497677 998 ntTSL 215.12■□□□□ 0.013e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.96□□□□□ -0.173e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-205ENST00000452977 818 ntTSL 513.39□□□□□ -0.273e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-212ENST00000494067 362 ntTSL 311.56□□□□□ -0.563e-6■□□□□ 9.2
TROVE2P10155 CTDSP1-210ENST00000491064 786 ntTSL 311.06□□□□□ -0.643e-6■□□□□ 9.2
TROVE2P10155 BCL2L1-208ENST00000450273 894 ntTSL 315.49■□□□□ 0.074e-6■□□□□ 9.2
TROVE2P10155 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.164e-6■□□□□ 9.2
TROVE2P10155 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.184e-6■□□□□ 9.2
TROVE2P10155 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.91□□□□□ -0.184e-6■□□□□ 9.2
TROVE2P10155 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.41■■□□□ 1.58e-9■□□□□ 9.2
TROVE2P10155 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.41■■□□□ 1.58e-9■□□□□ 9.2
TROVE2P10155 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.848e-9■□□□□ 9.2
TROVE2P10155 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.77■□□□□ 0.758e-9■□□□□ 9.2
TROVE2P10155 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.068e-9■□□□□ 9.2
TROVE2P10155 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.078e-9■□□□□ 9.2
TROVE2P10155 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.239e-8■□□□□ 9.2
TROVE2P10155 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC13.34□□□□□ -0.271e-16■□□□□ 9.2
TROVE2P10155 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.288e-9■□□□□ 9.2
TROVE2P10155 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.319e-8■□□□□ 9.2
TROVE2P10155 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.312e-9■□□□□ 9.2
TROVE2P10155 WDR27-211ENST00000546525 3511 ntTSL 1 (best)12.72□□□□□ -0.378e-9■□□□□ 9.2
TROVE2P10155 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC11.57□□□□□ -0.569e-8■□□□□ 9.2
TROVE2P10155 RPL21-206ENST00000466550 756 ntTSL 210.58□□□□□ -0.728e-9■□□□□ 9.2
TROVE2P10155 WDR27-202ENST00000441385 683 ntTSL 39.87□□□□□ -0.838e-9■□□□□ 9.2
TROVE2P10155 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.048e-9■□□□□ 9.2
TROVE2P10155 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.058e-9■□□□□ 9.2
TROVE2P10155 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.078e-9■□□□□ 9.2
TROVE2P10155 CHST15-203ENST00000462406 826 ntTSL 25.88□□□□□ -1.479e-8■□□□□ 9.2
TROVE2P10155 RPL21-205ENST00000461690 681 ntTSL 53.3□□□□□ -1.888e-9■□□□□ 9.2
TROVE2P10155 RPL21-208ENST00000483765 453 ntTSL 33.15□□□□□ -1.918e-9■□□□□ 9.2
TROVE2P10155 RPL21-209ENST00000485756 675 ntTSL 22.57□□□□□ -28e-9■□□□□ 9.2
TROVE2P10155 RPL21-210ENST00000493317 438 ntTSL 21.65□□□□□ -2.158e-9■□□□□ 9.2
TROVE2P10155 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.55■■□□□ 1.362e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.35■■□□□ 1.012e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.66■□□□□ 0.582e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.552e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.04■□□□□ 0.482e-6■□□□□ 9.2
TROVE2P10155 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC12.64□□□□□ -0.392e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.5□□□□□ -0.412e-6■□□□□ 9.2
TROVE2P10155 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.552e-6■□□□□ 9.2
TROVE2P10155 TSPAN3-209ENST00000560715 2892 ntTSL 27.04□□□□□ -1.282e-6■□□□□ 9.2
TROVE2P10155 COPA-207ENST00000545284 879 ntTSL 25.74□□□□□ -1.492e-6■□□□□ 9.2
TROVE2P10155 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.422e-83■□□□□ 9.2
TROVE2P10155 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.482e-83■□□□□ 9.2
TROVE2P10155 GNL3-211ENST00000496254 2118 ntTSL 55.83□□□□□ -1.482e-83■□□□□ 9.2
TROVE2P10155 GNL3-209ENST00000484022 668 ntTSL 23.5□□□□□ -1.852e-83■□□□□ 9.2
TROVE2P10155 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.079e-7■□□□□ 9.2
TROVE2P10155 TRIM28-204ENST00000594806 861 ntTSL 523.65■■□□□ 1.388e-18■□□□□ 9.2
TROVE2P10155 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.56■■□□□ 1.368e-18■□□□□ 9.2
TROVE2P10155 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.158e-18■□□□□ 9.2
TROVE2P10155 TRIM28-203ENST00000593582 533 ntTSL 313.48□□□□□ -0.258e-18■□□□□ 9.2
TROVE2P10155 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.622e-18■□□□□ 9.2
TROVE2P10155 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-18■□□□□ 9.2
TROVE2P10155 SLC39A7-204ENST00000463972 1410 ntTSL 213.38□□□□□ -0.272e-18■□□□□ 9.2
TROVE2P10155 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.32□□□□□ -0.125e-10■□□□□ 9.2
TROVE2P10155 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.09□□□□□ -0.635e-10■□□□□ 9.2
TROVE2P10155 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.345e-10■□□□□ 9.2
TROVE2P10155 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.365e-10■□□□□ 9.2
TROVE2P10155 GMDS-201ENST00000380805 1743 ntTSL 219.56■□□□□ 0.722e-8■□□□□ 9.1
TROVE2P10155 GMDS-209ENST00000531690 515 ntTSL 56.6□□□□□ -1.352e-8■□□□□ 9.1
TROVE2P10155 NOP58-208ENST00000488403 871 ntTSL 213.44□□□□□ -0.262e-47■□□□□ 9.1
TROVE2P10155 NOP58-202ENST00000426814 655 ntTSL 212.33□□□□□ -0.442e-47■□□□□ 9.1
TROVE2P10155 NOP58-204ENST00000467734 638 ntTSL 510.26□□□□□ -0.772e-47■□□□□ 9.1
TROVE2P10155 NOP58-205ENST00000472050 582 ntTSL 39.52□□□□□ -0.892e-47■□□□□ 9.1
TROVE2P10155 NOP58-209ENST00000492688 571 ntTSL 43.17□□□□□ -1.92e-47■□□□□ 9.1
TROVE2P10155 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.882e-12■□□□□ 9.1
TROVE2P10155 TRNP1-202ENST00000531285 575 ntAPPRIS ALT2 TSL 217.54■□□□□ 0.42e-12■□□□□ 9.1
TROVE2P10155 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC9.38□□□□□ -0.914e-9■□□□□ 9.1
TROVE2P10155 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.049e-13■□□□□ 9.1
TROVE2P10155 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.819e-13■□□□□ 9.1
TROVE2P10155 RPS27A-210ENST00000495843 1159 ntTSL 58.75□□□□□ -1.019e-13■□□□□ 9.1
TROVE2P10155 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.069e-13■□□□□ 9.1
TROVE2P10155 RPS27A-204ENST00000449323 422 ntTSL 33.59□□□□□ -1.839e-13■□□□□ 9.1
TROVE2P10155 RPS27A-208ENST00000478196 580 ntTSL 23.59□□□□□ -1.839e-13■□□□□ 9.1
TROVE2P10155 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.794e-7■□□□□ 9
TROVE2P10155 SNORD65-201ENST00000391079 73 ntBASIC4.51□□□□□ -1.691e-323■□□□□ 9
Retrieved 100 of 4,203 protein–RNA pairs in 209.9 ms