RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 NISCHQ9Y2I1 1504 aa34.89■■■■□ 3.18
CTDSP1-210ENST00000491064 ABCC9O60706 1549 aa31.85■■■□□ 2.69
CTDSP1-210ENST00000491064 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
CTDSP1-210ENST00000491064 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
CTDSP1-210ENST00000491064 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
CTDSP1-210ENST00000491064 NACADO15069 1562 aa29.86■■■□□ 2.37
CTDSP1-210ENST00000491064 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
CTDSP1-210ENST00000491064 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
CTDSP1-210ENST00000491064 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
CTDSP1-210ENST00000491064 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
CTDSP1-210ENST00000491064 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
CTDSP1-210ENST00000491064 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
CTDSP1-210ENST00000491064 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
CTDSP1-210ENST00000491064 DCAF1Q9Y4B6 1507 aa28.8■■■□□ 2.2
CTDSP1-210ENST00000491064 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
CTDSP1-210ENST00000491064 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
CTDSP1-210ENST00000491064 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
CTDSP1-210ENST00000491064 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
CTDSP1-210ENST00000491064 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
CTDSP1-210ENST00000491064 CUX2O14529 1486 aa27.63■■■□□ 2.01
CTDSP1-210ENST00000491064 NCAPD3P42695 1498 aa27.57■■■□□ 2
CTDSP1-210ENST00000491064 ERCC6Q03468 1493 aa27.52■■■□□ 2
CTDSP1-210ENST00000491064 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
CTDSP1-210ENST00000491064 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
CTDSP1-210ENST00000491064 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
CTDSP1-210ENST00000491064 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
CTDSP1-210ENST00000491064 NESP48681 1621 aa27.27■■□□□ 1.96
CTDSP1-210ENST00000491064 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
CTDSP1-210ENST00000491064 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
CTDSP1-210ENST00000491064 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
CTDSP1-210ENST00000491064 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
CTDSP1-210ENST00000491064 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
CTDSP1-210ENST00000491064 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
CTDSP1-210ENST00000491064 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
CTDSP1-210ENST00000491064 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
CTDSP1-210ENST00000491064 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
CTDSP1-210ENST00000491064 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
CTDSP1-210ENST00000491064 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
CTDSP1-210ENST00000491064 WDR62O43379 1518 aa26.62■■□□□ 1.85
CTDSP1-210ENST00000491064 WIZO95785 1651 aa26.55■■□□□ 1.84
CTDSP1-210ENST00000491064 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
CTDSP1-210ENST00000491064 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
CTDSP1-210ENST00000491064 CFTRP13569 1480 aa26.32■■□□□ 1.8
CTDSP1-210ENST00000491064 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
CTDSP1-210ENST00000491064 URB2Q14146 1524 aaKnown RBP26.23■■□□□ 1.79
CTDSP1-210ENST00000491064 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
CTDSP1-210ENST00000491064 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
CTDSP1-210ENST00000491064 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
CTDSP1-210ENST00000491064 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
CTDSP1-210ENST00000491064 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
CTDSP1-210ENST00000491064 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
CTDSP1-210ENST00000491064 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
CTDSP1-210ENST00000491064 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
CTDSP1-210ENST00000491064 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
CTDSP1-210ENST00000491064 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
CTDSP1-210ENST00000491064 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
CTDSP1-210ENST00000491064 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
CTDSP1-210ENST00000491064 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
CTDSP1-210ENST00000491064 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
CTDSP1-210ENST00000491064 CHD1O14646 1710 aa25.7■■□□□ 1.7
CTDSP1-210ENST00000491064 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
CTDSP1-210ENST00000491064 CYB5RLQ6IPT4 315 aa25.68■■□□□ 1.7
CTDSP1-210ENST00000491064 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.76e-12■■■■■ 82.1
CTDSP1-210ENST00000491064 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
CTDSP1-210ENST00000491064 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
CTDSP1-210ENST00000491064 FBLN2P98095 1184 aa25.54■■□□□ 1.68
CTDSP1-210ENST00000491064 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
CTDSP1-210ENST00000491064 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
CTDSP1-210ENST00000491064 SOGA1O94964 1423 aa25.44■■□□□ 1.66
CTDSP1-210ENST00000491064 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
CTDSP1-210ENST00000491064 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
CTDSP1-210ENST00000491064 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
CTDSP1-210ENST00000491064 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
CTDSP1-210ENST00000491064 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
CTDSP1-210ENST00000491064 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
CTDSP1-210ENST00000491064 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
CTDSP1-210ENST00000491064 CHMP7Q8WUX9 453 aaPredicted RBP25.3■■□□□ 1.64
CTDSP1-210ENST00000491064 CUX1P39880 1505 aa25.28■■□□□ 1.64
CTDSP1-210ENST00000491064 GRIN2BQ13224 1484 aa25.27■■□□□ 1.64
CTDSP1-210ENST00000491064 SYNJ2O15056 1496 aa25.24■■□□□ 1.63
CTDSP1-210ENST00000491064 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
CTDSP1-210ENST00000491064 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
CTDSP1-210ENST00000491064 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
CTDSP1-210ENST00000491064 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
CTDSP1-210ENST00000491064 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
CTDSP1-210ENST00000491064 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
CTDSP1-210ENST00000491064 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
CTDSP1-210ENST00000491064 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
CTDSP1-210ENST00000491064 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
CTDSP1-210ENST00000491064 NUP160Q12769 1436 aa24.89■■□□□ 1.58
CTDSP1-210ENST00000491064 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
CTDSP1-210ENST00000491064 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
CTDSP1-210ENST00000491064 FHAD1B1AJZ9 1412 aa24.79■■□□□ 1.56
CTDSP1-210ENST00000491064 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
CTDSP1-210ENST00000491064 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
CTDSP1-210ENST00000491064 KIF13AQ9H1H9 1805 aa24.74■■□□□ 1.55
CTDSP1-210ENST00000491064 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
CTDSP1-210ENST00000491064 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
CTDSP1-210ENST00000491064 PRG4Q92954 1404 aaPredicted RBP24.66■■□□□ 1.54
CTDSP1-210ENST00000491064 JPH4Q96JJ6 628 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms