RNA–Protein interactions for RNA: ENST00000484022.1

GNL3-209, Transcript of G protein nucleolar 3, humanhuman

TSL 2

Gene GNL3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-209ENST00000484022 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
GNL3-209ENST00000484022 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
GNL3-209ENST00000484022 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
GNL3-209ENST00000484022 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
GNL3-209ENST00000484022 FOXD1Q16676 465 aa13.88□□□□□ -0.19
GNL3-209ENST00000484022 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
GNL3-209ENST00000484022 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
GNL3-209ENST00000484022 ADRA2BP18089 450 aa13.28□□□□□ -0.28
GNL3-209ENST00000484022 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
GNL3-209ENST00000484022 MSH5O43196 834 aa12.71□□□□□ -0.37
GNL3-209ENST00000484022 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
GNL3-209ENST00000484022 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
GNL3-209ENST00000484022 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
GNL3-209ENST00000484022 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
GNL3-209ENST00000484022 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
GNL3-209ENST00000484022 KCNA4P22459 653 aa11.75□□□□□ -0.53
GNL3-209ENST00000484022 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
GNL3-209ENST00000484022 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
GNL3-209ENST00000484022 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
GNL3-209ENST00000484022 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
GNL3-209ENST00000484022 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
GNL3-209ENST00000484022 DCAF8L1A6NGE4 600 aa11.32□□□□□ -0.6
GNL3-209ENST00000484022 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
GNL3-209ENST00000484022 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
GNL3-209ENST00000484022 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
GNL3-209ENST00000484022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.659e-14■■■□□ 17.3
GNL3-209ENST00000484022 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
GNL3-209ENST00000484022 ZBTB22O15209 634 aa10.86□□□□□ -0.67
GNL3-209ENST00000484022 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
GNL3-209ENST00000484022 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
GNL3-209ENST00000484022 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
GNL3-209ENST00000484022 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
GNL3-209ENST00000484022 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
GNL3-209ENST00000484022 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
GNL3-209ENST00000484022 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
GNL3-209ENST00000484022 SPINK5Q9NQ38 1064 aaPredicted RBP10.63□□□□□ -0.71
GNL3-209ENST00000484022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
GNL3-209ENST00000484022 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
GNL3-209ENST00000484022 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
GNL3-209ENST00000484022 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.73
GNL3-209ENST00000484022 CAPN15O75808 1086 aa10.5□□□□□ -0.73
GNL3-209ENST00000484022 TRHP20396 242 aaPredicted RBP10.44□□□□□ -0.74
GNL3-209ENST00000484022 DSG3P32926 999 aa10.4□□□□□ -0.74
GNL3-209ENST00000484022 APLP2Q06481 763 aa10.4□□□□□ -0.74
GNL3-209ENST00000484022 ATXN8OSP0DMR3 200 aa10.37□□□□□ -0.75
GNL3-209ENST00000484022 ZNF219Q9P2Y4 722 aaPredicted RBP10.36□□□□□ -0.75
GNL3-209ENST00000484022 ABCB7O75027 752 aa10.33□□□□□ -0.76
GNL3-209ENST00000484022 POLA2Q14181 598 aa10.27□□□□□ -0.77
GNL3-209ENST00000484022 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
GNL3-209ENST00000484022 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
GNL3-209ENST00000484022 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
GNL3-209ENST00000484022 FBLN2P98095 1184 aa9.91□□□□□ -0.82
GNL3-209ENST00000484022 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
GNL3-209ENST00000484022 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
GNL3-209ENST00000484022 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
GNL3-209ENST00000484022 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
GNL3-209ENST00000484022 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
GNL3-209ENST00000484022 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
GNL3-209ENST00000484022 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
GNL3-209ENST00000484022 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
GNL3-209ENST00000484022 REM2Q8IYK8 340 aaPredicted RBP9.67□□□□□ -0.86
GNL3-209ENST00000484022 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
GNL3-209ENST00000484022 FKBP8Q14318 412 aa9.58□□□□□ -0.88
GNL3-209ENST00000484022 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
GNL3-209ENST00000484022 PROM2Q8N271 834 aa9.54□□□□□ -0.88
GNL3-209ENST00000484022 CHRDL2Q6WN34 429 aa9.52□□□□□ -0.89
GNL3-209ENST00000484022 SPDYE1Q8NFV5 336 aaPredicted RBP9.47□□□□□ -0.89
GNL3-209ENST00000484022 CLEC11AQ9Y240 323 aa9.47□□□□□ -0.89
GNL3-209ENST00000484022 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
GNL3-209ENST00000484022 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
GNL3-209ENST00000484022 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
GNL3-209ENST00000484022 POTEHQ6S545 545 aa9.36□□□□□ -0.91
GNL3-209ENST00000484022 NISCHQ9Y2I1 1504 aa9.36□□□□□ -0.91
GNL3-209ENST00000484022 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
GNL3-209ENST00000484022 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
GNL3-209ENST00000484022 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
GNL3-209ENST00000484022 CREBZFQ9NS37 354 aa9.28□□□□□ -0.92
GNL3-209ENST00000484022 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
GNL3-209ENST00000484022 MIER1Q8N108 512 aa9.18□□□□□ -0.94
GNL3-209ENST00000484022 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
GNL3-209ENST00000484022 FARP1Q9Y4F1 1045 aaPredicted RBP9.18□□□□□ -0.94
GNL3-209ENST00000484022 EVX2Q03828 476 aa9.15□□□□□ -0.94
GNL3-209ENST00000484022 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
GNL3-209ENST00000484022 ABCC9O60706 1549 aa9.11□□□□□ -0.95
GNL3-209ENST00000484022 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
GNL3-209ENST00000484022 HAX1O00165 279 aa9.1□□□□□ -0.95
GNL3-209ENST00000484022 C19orf67A6NJJ6 358 aa9.08□□□□□ -0.96
GNL3-209ENST00000484022 IFNLR1Q8IU57 520 aaPredicted RBP9.07□□□□□ -0.96
GNL3-209ENST00000484022 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
GNL3-209ENST00000484022 NUBP1P53384 320 aa9.01□□□□□ -0.97
GNL3-209ENST00000484022 PLEKHG5O94827 1062 aa9□□□□□ -0.97
GNL3-209ENST00000484022 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
GNL3-209ENST00000484022 RASEFQ8IZ41 740 aa9□□□□□ -0.97
GNL3-209ENST00000484022 KLHL34Q8N239 644 aa8.97□□□□□ -0.97
GNL3-209ENST00000484022 DNAJC5Q9H3Z4 198 aa8.96□□□□□ -0.98
GNL3-209ENST00000484022 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
GNL3-209ENST00000484022 ZBTB47Q9UFB7 747 aaPredicted RBP8.94□□□□□ -0.98
GNL3-209ENST00000484022 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
GNL3-209ENST00000484022 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
GNL3-209ENST00000484022 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms