RNA–Protein interactions for RNA: ENST00000402285.7

RPS27A-202, Transcript of ribosomal protein S27a, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPS27A, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-202ENST00000402285 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
RPS27A-202ENST00000402285 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
RPS27A-202ENST00000402285 ABCC9O60706 1549 aa20.78■□□□□ 0.92
RPS27A-202ENST00000402285 ZCCHC6Q5VYS8 1495 aaKnown RBP20.51■□□□□ 0.87
RPS27A-202ENST00000402285 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
RPS27A-202ENST00000402285 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
RPS27A-202ENST00000402285 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
RPS27A-202ENST00000402285 NACADO15069 1562 aa20.26■□□□□ 0.83
RPS27A-202ENST00000402285 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
RPS27A-202ENST00000402285 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
RPS27A-202ENST00000402285 SHROOM4Q9ULL8 1493 aa19.61■□□□□ 0.73
RPS27A-202ENST00000402285 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
RPS27A-202ENST00000402285 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
RPS27A-202ENST00000402285 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
RPS27A-202ENST00000402285 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
RPS27A-202ENST00000402285 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
RPS27A-202ENST00000402285 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
RPS27A-202ENST00000402285 MROH2BQ7Z745 1585 aa18.91■□□□□ 0.62
RPS27A-202ENST00000402285 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
RPS27A-202ENST00000402285 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
RPS27A-202ENST00000402285 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
RPS27A-202ENST00000402285 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
RPS27A-202ENST00000402285 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
RPS27A-202ENST00000402285 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
RPS27A-202ENST00000402285 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RPS27A-202ENST00000402285 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
RPS27A-202ENST00000402285 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
RPS27A-202ENST00000402285 WIZO95785 1651 aa18.65■□□□□ 0.58
RPS27A-202ENST00000402285 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
RPS27A-202ENST00000402285 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
RPS27A-202ENST00000402285 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
RPS27A-202ENST00000402285 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
RPS27A-202ENST00000402285 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
RPS27A-202ENST00000402285 CFTRP13569 1480 aa18.19■□□□□ 0.5
RPS27A-202ENST00000402285 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
RPS27A-202ENST00000402285 NESP48681 1621 aa18.09■□□□□ 0.49
RPS27A-202ENST00000402285 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
RPS27A-202ENST00000402285 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
RPS27A-202ENST00000402285 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
RPS27A-202ENST00000402285 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
RPS27A-202ENST00000402285 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
RPS27A-202ENST00000402285 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
RPS27A-202ENST00000402285 WRNQ14191 1432 aaPredicted RBP eCLIP17.8■□□□□ 0.446e-18■□□□□ 8
RPS27A-202ENST00000402285 MRC2Q9UBG0 1479 aa17.78■□□□□ 0.44
RPS27A-202ENST00000402285 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
RPS27A-202ENST00000402285 KIF21AQ7Z4S6 1674 aa17.75■□□□□ 0.43
RPS27A-202ENST00000402285 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
RPS27A-202ENST00000402285 TRIM41Q8WV44 630 aa17.72■□□□□ 0.43
RPS27A-202ENST00000402285 CUX1P39880 1505 aa17.71■□□□□ 0.43
RPS27A-202ENST00000402285 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
RPS27A-202ENST00000402285 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
RPS27A-202ENST00000402285 WDR62O43379 1518 aa17.68■□□□□ 0.42
RPS27A-202ENST00000402285 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
RPS27A-202ENST00000402285 TOP2BQ02880 1626 aa17.65■□□□□ 0.42
RPS27A-202ENST00000402285 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
RPS27A-202ENST00000402285 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
RPS27A-202ENST00000402285 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
RPS27A-202ENST00000402285 SOGA1O94964 1423 aa17.59■□□□□ 0.41
RPS27A-202ENST00000402285 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
RPS27A-202ENST00000402285 CUX2O14529 1486 aa17.57■□□□□ 0.4
RPS27A-202ENST00000402285 IFT140Q96RY7 1462 aa17.53■□□□□ 0.4
RPS27A-202ENST00000402285 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
RPS27A-202ENST00000402285 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
RPS27A-202ENST00000402285 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
RPS27A-202ENST00000402285 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
RPS27A-202ENST00000402285 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
RPS27A-202ENST00000402285 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
RPS27A-202ENST00000402285 EEA1Q15075 1411 aa17.37■□□□□ 0.37
RPS27A-202ENST00000402285 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.373e-8■■■■■ 53.2
RPS27A-202ENST00000402285 IGF1RP08069 1367 aa17.35■□□□□ 0.37
RPS27A-202ENST00000402285 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
RPS27A-202ENST00000402285 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
RPS27A-202ENST00000402285 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
RPS27A-202ENST00000402285 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
RPS27A-202ENST00000402285 GRIN2BQ13224 1484 aa17.3■□□□□ 0.36
RPS27A-202ENST00000402285 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
RPS27A-202ENST00000402285 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
RPS27A-202ENST00000402285 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
RPS27A-202ENST00000402285 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
RPS27A-202ENST00000402285 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
RPS27A-202ENST00000402285 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
RPS27A-202ENST00000402285 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
RPS27A-202ENST00000402285 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
RPS27A-202ENST00000402285 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
RPS27A-202ENST00000402285 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
RPS27A-202ENST00000402285 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
RPS27A-202ENST00000402285 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
RPS27A-202ENST00000402285 FBLN2P98095 1184 aa17.11■□□□□ 0.33
RPS27A-202ENST00000402285 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
RPS27A-202ENST00000402285 CUL7Q14999 1698 aa17.1■□□□□ 0.33
RPS27A-202ENST00000402285 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
RPS27A-202ENST00000402285 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
RPS27A-202ENST00000402285 KIF21BO75037 1637 aa17.03■□□□□ 0.32
RPS27A-202ENST00000402285 LOC105371045A0A1W2PR82 267 aa17.03■□□□□ 0.32
RPS27A-202ENST00000402285 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
RPS27A-202ENST00000402285 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
RPS27A-202ENST00000402285 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
RPS27A-202ENST00000402285 NUP160Q12769 1436 aa16.99■□□□□ 0.31
RPS27A-202ENST00000402285 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
RPS27A-202ENST00000402285 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms