RNA–Protein interactions for RNA: ENST00000272274.8

RPL21-201, Transcript of ribosomal protein L21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPL21, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL21-201ENST00000272274 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
RPL21-201ENST00000272274 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
RPL21-201ENST00000272274 ABCC9O60706 1549 aa22.66■■□□□ 1.22
RPL21-201ENST00000272274 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
RPL21-201ENST00000272274 NACADO15069 1562 aa21.44■■□□□ 1.02
RPL21-201ENST00000272274 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
RPL21-201ENST00000272274 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
RPL21-201ENST00000272274 UNC13AQ9UPW8 1703 aa21.2■□□□□ 0.98
RPL21-201ENST00000272274 MYO15BQ96JP2 1530 aa21.13■□□□□ 0.97
RPL21-201ENST00000272274 PABPN1Q86U42 306 aaKnown RBP eCLIP21.09■□□□□ 0.97
RPL21-201ENST00000272274 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
RPL21-201ENST00000272274 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
RPL21-201ENST00000272274 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
RPL21-201ENST00000272274 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
RPL21-201ENST00000272274 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
RPL21-201ENST00000272274 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
RPL21-201ENST00000272274 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
RPL21-201ENST00000272274 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
RPL21-201ENST00000272274 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
RPL21-201ENST00000272274 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
RPL21-201ENST00000272274 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
RPL21-201ENST00000272274 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
RPL21-201ENST00000272274 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
RPL21-201ENST00000272274 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
RPL21-201ENST00000272274 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
RPL21-201ENST00000272274 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
RPL21-201ENST00000272274 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
RPL21-201ENST00000272274 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
RPL21-201ENST00000272274 NESP48681 1621 aa19.51■□□□□ 0.71
RPL21-201ENST00000272274 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
RPL21-201ENST00000272274 CUX2O14529 1486 aa19.47■□□□□ 0.71
RPL21-201ENST00000272274 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
RPL21-201ENST00000272274 WIZO95785 1651 aa19.34■□□□□ 0.69
RPL21-201ENST00000272274 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
RPL21-201ENST00000272274 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
RPL21-201ENST00000272274 KIF21AQ7Z4S6 1674 aa19.29■□□□□ 0.68
RPL21-201ENST00000272274 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
RPL21-201ENST00000272274 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
RPL21-201ENST00000272274 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
RPL21-201ENST00000272274 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
RPL21-201ENST00000272274 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
RPL21-201ENST00000272274 WDR62O43379 1518 aa19.02■□□□□ 0.64
RPL21-201ENST00000272274 CFTRP13569 1480 aa18.98■□□□□ 0.63
RPL21-201ENST00000272274 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
RPL21-201ENST00000272274 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
RPL21-201ENST00000272274 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
RPL21-201ENST00000272274 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
RPL21-201ENST00000272274 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
RPL21-201ENST00000272274 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
RPL21-201ENST00000272274 ZNF608Q9ULD9 1512 aaPredicted RBP18.6■□□□□ 0.57
RPL21-201ENST00000272274 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
RPL21-201ENST00000272274 TRIM41Q8WV44 630 aa18.58■□□□□ 0.56
RPL21-201ENST00000272274 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
RPL21-201ENST00000272274 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
RPL21-201ENST00000272274 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
RPL21-201ENST00000272274 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
RPL21-201ENST00000272274 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
RPL21-201ENST00000272274 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
RPL21-201ENST00000272274 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
RPL21-201ENST00000272274 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.542e-9■■■■■ 36.8
RPL21-201ENST00000272274 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
RPL21-201ENST00000272274 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
RPL21-201ENST00000272274 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
RPL21-201ENST00000272274 CHD1O14646 1710 aa18.4■□□□□ 0.54
RPL21-201ENST00000272274 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
RPL21-201ENST00000272274 CUX1P39880 1505 aa18.35■□□□□ 0.53
RPL21-201ENST00000272274 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
RPL21-201ENST00000272274 SOGA1O94964 1423 aa18.34■□□□□ 0.53
RPL21-201ENST00000272274 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
RPL21-201ENST00000272274 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
RPL21-201ENST00000272274 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
RPL21-201ENST00000272274 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
RPL21-201ENST00000272274 FBLN2P98095 1184 aa18.25■□□□□ 0.51
RPL21-201ENST00000272274 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
RPL21-201ENST00000272274 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
RPL21-201ENST00000272274 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
RPL21-201ENST00000272274 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
RPL21-201ENST00000272274 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
RPL21-201ENST00000272274 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
RPL21-201ENST00000272274 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
RPL21-201ENST00000272274 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
RPL21-201ENST00000272274 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
RPL21-201ENST00000272274 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
RPL21-201ENST00000272274 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
RPL21-201ENST00000272274 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
RPL21-201ENST00000272274 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
RPL21-201ENST00000272274 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
RPL21-201ENST00000272274 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
RPL21-201ENST00000272274 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.486e-7■■■■■ 33.4
RPL21-201ENST00000272274 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
RPL21-201ENST00000272274 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
RPL21-201ENST00000272274 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
RPL21-201ENST00000272274 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
RPL21-201ENST00000272274 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
RPL21-201ENST00000272274 NUP160Q12769 1436 aa17.89■□□□□ 0.46
RPL21-201ENST00000272274 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
RPL21-201ENST00000272274 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
RPL21-201ENST00000272274 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
RPL21-201ENST00000272274 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
RPL21-201ENST00000272274 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms