RNA–Protein interactions for RNA: ENST00000517836.5

PCM1-205, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-205ENST00000517836 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
PCM1-205ENST00000517836 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
PCM1-205ENST00000517836 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
PCM1-205ENST00000517836 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PCM1-205ENST00000517836 FOXD1Q16676 465 aa20.41■□□□□ 0.86
PCM1-205ENST00000517836 PLPPR3Q6T4P5 718 aa19.73■□□□□ 0.75
PCM1-205ENST00000517836 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
PCM1-205ENST00000517836 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
PCM1-205ENST00000517836 ADRA2BP18089 450 aa19.27■□□□□ 0.68
PCM1-205ENST00000517836 MSH5O43196 834 aa19.19■□□□□ 0.66
PCM1-205ENST00000517836 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
PCM1-205ENST00000517836 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
PCM1-205ENST00000517836 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
PCM1-205ENST00000517836 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
PCM1-205ENST00000517836 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
PCM1-205ENST00000517836 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
PCM1-205ENST00000517836 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
PCM1-205ENST00000517836 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
PCM1-205ENST00000517836 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
PCM1-205ENST00000517836 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
PCM1-205ENST00000517836 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
PCM1-205ENST00000517836 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
PCM1-205ENST00000517836 KCNA4P22459 653 aa16.5■□□□□ 0.23
PCM1-205ENST00000517836 RNF39Q9H2S5 420 aa16.32■□□□□ 0.2
PCM1-205ENST00000517836 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
PCM1-205ENST00000517836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.163e-9■■■□□ 18.3
PCM1-205ENST00000517836 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
PCM1-205ENST00000517836 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
PCM1-205ENST00000517836 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
PCM1-205ENST00000517836 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
PCM1-205ENST00000517836 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
PCM1-205ENST00000517836 CAPN15O75808 1086 aa15.42■□□□□ 0.06
PCM1-205ENST00000517836 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
PCM1-205ENST00000517836 DSG3P32926 999 aa15.26■□□□□ 0.03
PCM1-205ENST00000517836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.24■□□□□ 0.03
PCM1-205ENST00000517836 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
PCM1-205ENST00000517836 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
PCM1-205ENST00000517836 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
PCM1-205ENST00000517836 ZBTB22O15209 634 aa15.21■□□□□ 0.03
PCM1-205ENST00000517836 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
PCM1-205ENST00000517836 POTEHQ6S545 545 aa15.17■□□□□ 0.02
PCM1-205ENST00000517836 APLP2Q06481 763 aa15.16■□□□□ 0.02
PCM1-205ENST00000517836 ABCB7O75027 752 aa15.15■□□□□ 0.02
PCM1-205ENST00000517836 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
PCM1-205ENST00000517836 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
PCM1-205ENST00000517836 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
PCM1-205ENST00000517836 POLA2Q14181 598 aa14.89□□□□□ -0.03
PCM1-205ENST00000517836 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
PCM1-205ENST00000517836 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
PCM1-205ENST00000517836 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
PCM1-205ENST00000517836 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
PCM1-205ENST00000517836 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
PCM1-205ENST00000517836 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
PCM1-205ENST00000517836 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
PCM1-205ENST00000517836 FBLN2P98095 1184 aa14.27□□□□□ -0.13
PCM1-205ENST00000517836 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
PCM1-205ENST00000517836 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
PCM1-205ENST00000517836 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
PCM1-205ENST00000517836 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
PCM1-205ENST00000517836 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
PCM1-205ENST00000517836 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
PCM1-205ENST00000517836 SP7Q8TDD2 431 aaPredicted RBP14.01□□□□□ -0.17
PCM1-205ENST00000517836 PITPNM1O00562 1244 aa14□□□□□ -0.17
PCM1-205ENST00000517836 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
PCM1-205ENST00000517836 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
PCM1-205ENST00000517836 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
PCM1-205ENST00000517836 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCM1-205ENST00000517836 FXR2P51116 673 aaKnown RBP eCLIP13.79□□□□□ -0.23e-7■■■□□ 16.5
PCM1-205ENST00000517836 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
PCM1-205ENST00000517836 HAX1O00165 279 aa13.71□□□□□ -0.21
PCM1-205ENST00000517836 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PCM1-205ENST00000517836 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
PCM1-205ENST00000517836 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
PCM1-205ENST00000517836 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
PCM1-205ENST00000517836 EVX2Q03828 476 aa13.51□□□□□ -0.25
PCM1-205ENST00000517836 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
PCM1-205ENST00000517836 PROM2Q8N271 834 aa13.36□□□□□ -0.27
PCM1-205ENST00000517836 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
PCM1-205ENST00000517836 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
PCM1-205ENST00000517836 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
PCM1-205ENST00000517836 FKBP8Q14318 412 aa13.3□□□□□ -0.28
PCM1-205ENST00000517836 GABBR2O75899 941 aa13.2□□□□□ -0.3
PCM1-205ENST00000517836 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
PCM1-205ENST00000517836 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
PCM1-205ENST00000517836 LHX8Q68G74 356 aa13.13□□□□□ -0.31
PCM1-205ENST00000517836 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
PCM1-205ENST00000517836 MIER1Q8N108 512 aa13.05□□□□□ -0.32
PCM1-205ENST00000517836 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCM1-205ENST00000517836 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
PCM1-205ENST00000517836 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
PCM1-205ENST00000517836 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
PCM1-205ENST00000517836 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
PCM1-205ENST00000517836 POTEIP0CG38 1075 aa12.92□□□□□ -0.34
PCM1-205ENST00000517836 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
PCM1-205ENST00000517836 PLEKHG5O94827 1062 aa12.91□□□□□ -0.34
PCM1-205ENST00000517836 CLCN6P51797 869 aa12.9□□□□□ -0.34
PCM1-205ENST00000517836 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
PCM1-205ENST00000517836 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
PCM1-205ENST00000517836 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
PCM1-205ENST00000517836 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms